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Details of CancerPDF entry with Sequence NRGDSTFESKSYKMA
Primary information
sequence IDSeq_5758
Peptide sequenceNRGDSTFESKSYKMA
CancerPDF_ID CancerPDF_ID1222, CancerPDF_ID9723, CancerPDF_ID9740,
PMID21136997,21533267,21533267
Protein NameFibrinogen alpha,Fibrinogen alpha chain,Fibrinogen alpha chain
UniprotKB Entry NameFIBA_HUMAN,FIBA_HUMAN,FIBA_HUMAN
FluidSerum,Serum,Serum
M/Z1719.78863,574.26,579.6
Charge1,3,3
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,LC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC/MS/MS,LC/MS/MS
Quantification TechniqueLC-ESI-MS,Multiple Reaction Monitoring,Multiple Reaction Monitoring
Labelled/Label FreeLabel Free,Label Free,Label Free
FDRNA,1.49,1.49
CancerPDF_ID CancerPDF_ID1222, CancerPDF_ID9723, CancerPDF_ID9740,
p-ValueNA,NA,NA
SoftwareMASCOT(v. 2.2.01),MASCOT,MASCOT
Length15,15,15
Cancer TypeColorectal cancer,Lung adenocarcinoma,Lung adenocarcinoma
DatabaseSwissProt Database,Swissprot Database (57.4),Swissprot Database (57.4)
ModificationNA,NA,Oxidation
Number of Patients30 patients and 30 healthy controls,62 lung adenocarcinoma and 30 healthy control,62 lung adenocarcinoma and 30 healthy control
RegulationNA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal","Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationLeave One out Cross validation,MRM-based validation of 19 candidates,MRM-based validation of 19 candidates
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasNA
IEDB