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Details of CancerPDF entry with Sequence LPGPPDVPDHA
Primary information
sequence IDSeq_4989
Peptide sequenceLPGPPDVPDHA
CancerPDF_ID CancerPDF_ID9049, CancerPDF_ID9803,
PMID24694173,21533267
Protein NameIsoform 1 of Inter-alpha-trypsin inhibitor heavy chain H4,Inter-alpha-trypsin inhibitor heavy chain H4
UniprotKB Entry NameITIH4_HUMAN,ITIH4_HUMAN
FluidAscites fluid,Serum
M/ZNA,557.77
Charge1,2
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLTQ-Orbitrap XL,LC-MS
Peptide Identification techniqueX tandem for peptide identification,LC/MS/MS
Quantification TechniqueNA,Multiple Reaction Monitoring
Labelled/Label FreeLabel Free,Label Free
FDRNA,1.49
CancerPDF_ID CancerPDF_ID9049, CancerPDF_ID9803,
p-ValueNA,NA
Software"X tandem for peptide identification,Scaffold 2 software for any modification analysis",MASCOT
Length11,11
Cancer TypeOvarian cancer,Lung adenocarcinoma
DatabaseIPI00896419,Swissprot Database (57.4)
ModificationNA,NA
Number of Patients3 ovarian cancer patient and 3 non cancerous control,62 lung adenocarcinoma and 30 healthy control
RegulationUniquely expressed in ovarian cancer patient,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationNA,MRM-based validation of 19 candidates
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB