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Details of CancerPDF entry with Sequence LMIDQNTKSPLFMGKVVNPTQK
Primary information
sequence IDSeq_4942
Peptide sequenceLMIDQNTKSPLFMGKVVNPTQK
CancerPDF_ID CancerPDF_ID63, CancerPDF_ID8598,
PMID16896061,23667664
Protein NameAlpha-1-antitrypsin precursor,Alpha-1 antitrypsin
UniprotKB Entry NameA1AT_HUMAN,A1AT_HUMAN
FluidSerum,Serum
M/Z830.51,2488.32
Charge1,1
Mass (in Da)2489.3,2491
fdrNA,NA
Profiling TechniqueMALDI-TOF,MALDI-TOF
Peptide Identification techniqueQ/TOF MS/MS,FT-ICR MS/MS + nano-HPLC
Quantification TechniqueNA,NA
Labelled/Label FreeLabel Free,Label Free
FDRNA,NA
CancerPDF_ID CancerPDF_ID63, CancerPDF_ID8598,
p-Value1.00E-05,NA
SoftwareMASCOT,MASCOT
Length22,22
Cancer TypeMetastatic thyroid carcinomas,"Breast cancer, Lung cancer, Rectal cancer"
DatabaseNCBI refseq Protein Database,NA
ModificationNA,NA
Number of Patients40 metastatic thyroid carcinoma patients and 40 normal for training phase and 10 metastatic thyroid carcinoma and 10 normal individuals for independent validation,"Breast Cancer =84, lung cancer= 70, Rectal cancer = 30patients; 500 healthy"
RegulationNA,NA
ValidationIndependent validation,NA
Sensitivity95% on independent dataset,NA
Specificity95% on independent dataset,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB