| Primary information |
|---|
| sequence ID | Seq_4354 |
| Peptide sequence | KREEAPSLRPAPPPISGGGYR |
| CancerPDF_ID | CancerPDF_ID843, CancerPDF_ID2791, CancerPDF_ID9489, CancerPDF_ID10517, |
| PMID | 19795908,21136997,26379225,21805675 |
| Protein Name | Fibrinogen beta chain,Fibrinogen beta chain,Fibrinogen beta chain,Fibrinogen beta chain |
| UniprotKB Entry Name | FIBB_HUMAN,FIBB_HUMAN,FIBB_HUMAN,FIBB_HUMAN |
| Fluid | Plasma,Plasma,Plasma,Urine |
| M/Z | 745.73,2234.192,2235.21,2235.2016 |
| Charge | 3,1,NA,NA |
| Mass (in Da) | NA,NA,NA,NA |
| fdr | NA,NA,NA,NA |
| Profiling Technique | LC-MS,LC-MS,MALDI-TOF,MALDI-TOF |
| Peptide Identification technique | MALDI-TOF/TOF,LC-MS-MS/MS,MALDI-TOF/TOF,MALDI-TOF-MS |
| Quantification Technique | LC-MRM (multiple reaction monitoring),LC-ESI-MS,NA,NA |
| Labelled/Label Free | Labelled,Label Free,Label Free,Label Free |
| FDR | less than 7%,NA,NA,1 |
| CancerPDF_ID | CancerPDF_ID843, CancerPDF_ID2791, CancerPDF_ID9489, CancerPDF_ID10517, |
| p-Value | NA,NA,NA,NA |
| Software | FlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01),MASCOT (v 2.3),NA |
| Length | 21,21,21,21 |
| Cancer Type | Ductal adenocarcinoma of the pancreas (DAP),Normal,Colorectal cancer,Muscle-invasive bladder cancer |
| Database | NCBI refseq Protein Database,SwissProt Database,UniprotKB,SwissProt Database |
| Modification | NA,NA,NA,NA |
| Number of Patients | "42 normal, 26 patients",27 healthy individuals,"94 patients with CRC, 23 with liver metastasis from CRC (histologically defined) and 34 subjects, which underwent colonoscopy and resulted negative",751 bladder cancer and 127 control |
| Regulation | NA,NA,"Similar median ion intensity between controls and liver metastasis, and higher median ion intensity for adenoma and CRC groups.",Differentially expressed between cancer vs normal samples |
| Validation | NA,Leave One out Cross validation,NA,Mann-Whitney tests and areas under receiver-operator characteristic |
| Sensitivity | NA,NA,NA,NA |
| Specificity | NA,NA,NA,NA |
| Accuracy | NA,NA,NA,NA |
| Peptide Atlas | PeptideAtlas |
| IEDB | |