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Details of CancerPDF entry with Sequence KPVDPDGPENGPP
Primary information
sequence IDSeq_4316
Peptide sequenceKPVDPDGPENGPP
CancerPDF_ID CancerPDF_ID9003, CancerPDF_ID11800,
PMID24694173,26992070
Protein NameIsoform 1A of Desmocollin-1,Desmocollin-1
UniprotKB Entry NameNA,DSC1_HUMAN
FluidAscites fluid,Serum
M/ZNA,NA
Charge1,NA
Mass (in Da)NA,1318.631761
fdrNA,NA
Profiling TechniqueLTQ-Orbitrap XL,LC-MS
Peptide Identification techniqueX tandem for peptide identification,LC-MS/MS
Quantification TechniqueNA,NA
Labelled/Label FreeLabel Free,Label Free
FDRNA,FDR 1 %
CancerPDF_ID CancerPDF_ID9003, CancerPDF_ID11800,
p-ValueNA,NA
Software"X tandem for peptide identification,Scaffold 2 software for any modification analysis",SEQUEST and Maxquant
Length13,13
Cancer TypeOvarian cancer,Melanoma
Database"IPI00216099,IPI00386975",SwissProt Database
ModificationNA,NA
Number of Patients3 ovarian cancer patient and 3 non cancerous control,8 cancer samples and 4 healthy samples
RegulationUniquely expressed in ovarian cancer patient,"Present in 1 cancer samples out of 8 cancer samples. ,Present in 0 healthy samples out of 4 healthy samples."
ValidationNA,na
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB