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Details of CancerPDF entry with Sequence KLPGGSYMAK
Primary information
sequence IDSeq_4257
Peptide sequenceKLPGGSYMAK
CancerPDF_ID CancerPDF_ID11780, CancerPDF_ID12656,
PMID26992070,26992070
Protein Name"HLA class II histocompatibility antigen, DR beta 5 chain","HLA class II histocompatibility antigen, DR beta 5 chain"
UniprotKB Entry NameDRB5_HUMAN,GIMA4_HUMAN
FluidSerum,Serum
M/ZNA,NA
ChargeNA,NA
Mass (in Da)1051.564012,1067.553392
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueLC-MS/MS,LC-MS/MS
Quantification TechniqueNA,NA
Labelled/Label FreeLabel Free,Label Free
FDRFDR 1 %,FDR 1 %
CancerPDF_ID CancerPDF_ID11780, CancerPDF_ID12656,
p-ValueNA,NA
SoftwareSEQUEST and Maxquant,"Maxquant,Proteome Discoverer"
Length10,10
Cancer TypeMelanoma,Melanoma
DatabaseSwissProt Database,SwissProt Database
ModificationNA,NA
Number of Patients8 cancer samples and 4 healthy samples,8 cancer samples and 4 healthy samples
Regulation"Present in 4 cancer samples out of 8 cancer samples. ,Present in 1 healthy samples out of 4 healthy samples.","Present in 4 cancer samples out of 8 cancer samples. ,Present in 1 healthy samples out of 4 healthy samples."
Validationna,NA
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB438686