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Details of CancerPDF entry with Sequence HVQPQPQPKPQVQLH
Primary information
sequence IDSeq_3579
Peptide sequenceHVQPQPQPKPQVQLH
CancerPDF_ID CancerPDF_ID2010, CancerPDF_ID11617,
PMID21136997,26992070
Protein NameZyxin,Zyxin
UniprotKB Entry NameZYX_HUMAN,NA
FluidSerum,Serum
M/Z1759.94819,1759.9482
Charge1,NA
Mass (in Da)NA,1760.957859
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC-MS/MS
Quantification TechniqueLC-ESI-MS,NA
Labelled/Label FreeLabel Free,Label Free
FDRNA,FDR 1 %
CancerPDF_ID CancerPDF_ID2010, CancerPDF_ID11617,
p-ValueNA,NA
SoftwareMASCOT(v. 2.2.01),SEQUEST and Maxquant
Length15,15
Cancer TypeColorectal cancer,Melanoma
DatabaseSwissProt Database,SwissProt Database
ModificationNA,NA
Number of Patients30 patients and 30 healthy controls,8 cancer samples and 4 healthy samples
RegulationNA,"Present in 6 cancer samples out of 8 cancer samples. ,Present in 4 healthy samples out of 4 healthy samples."
ValidationLeave One out Cross validation,na
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB