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Details of CancerPDF entry with Sequence HPNSPLDEENLTQENQDR
Primary information
sequence IDSeq_3500
Peptide sequenceHPNSPLDEENLTQENQDR
CancerPDF_ID CancerPDF_ID1966, CancerPDF_ID3113, CancerPDF_ID9527,
PMID21136997,21136997,21533267
Protein NameAlpha-1-antichymotrypsin,Alpha-1-antichymotrypsin,Alpha-1-antichymotrypsin
UniprotKB Entry NameAACT_HUMAN,AACT_HUMAN,AACT_HUMAN
FluidSerum,Plasma,Serum
M/Z2134.95155,2134.9516,712.64
Charge1,1,3
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,LC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC-MS-MS/MS,LC/MS/MS
Quantification TechniqueLC-ESI-MS,LC-ESI-MS,Multiple Reaction Monitoring
Labelled/Label FreeLabel Free,Label Free,Label Free
FDRNA,NA,1.49
CancerPDF_ID CancerPDF_ID1966, CancerPDF_ID3113, CancerPDF_ID9527,
p-ValueNA,NA,NA
SoftwareMASCOT(v. 2.2.01),MASCOT(v. 2.2.01),MASCOT
Length18,18,18
Cancer TypeColorectal cancer,Normal,Lung adenocarcinoma
DatabaseSwissProt Database,SwissProt Database,Swissprot Database (57.4)
ModificationNA,NA,NA
Number of Patients30 patients and 30 healthy controls,27 healthy individuals,62 lung adenocarcinoma and 30 healthy control
RegulationNA,NA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationLeave One out Cross validation,Leave One out Cross validation,MRM-based validation of 19 candidates
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasPeptideAtlas
IEDB