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Details of CancerPDF entry with Sequence HLAPYSDELR
Primary information
sequence IDSeq_3458
Peptide sequenceHLAPYSDELR
CancerPDF_ID CancerPDF_ID282, CancerPDF_ID1605,
PMID19795908,21136997
Protein NameApolipoprotein A-I,Apolipoprotein A-I
UniprotKB Entry NameAPOA1_HUMAN,APOA1_HUMAN
FluidPlasma,Serum
M/Z600.8005,1199.59349
Charge2,1
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),LC-ESI-MS
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,NA
CancerPDF_ID CancerPDF_ID282, CancerPDF_ID1605,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01)
Length10,10
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Colorectal cancer
DatabaseNCBI refseq Protein Database,SwissProt Database
ModificationNA,NA
Number of Patients"42 normal, 28 patients",30 patients and 30 healthy controls
RegulationNA,NA
ValidationNA,Leave One out Cross validation
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB