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Details of CancerPDF entry with Sequence GTLSGIGTLDGFRHRHPDEAAF
Primary information
sequence IDSeq_3265
Peptide sequenceGTLSGIGTLDGFRHRHPDEAAF
CancerPDF_ID CancerPDF_ID659, CancerPDF_ID10557,
PMID19795908,21805675
Protein NameFibrinogen alpha chain,Fibrinogen alpha chain
UniprotKB Entry NameFIBA_HUMAN,FIBA_HUMAN
FluidPlasma,Urine
M/Z785.39,2354.154
Charge3,NA
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,MALDI-TOF
Peptide Identification techniqueMALDI-TOF/TOF,MALDI-TOF-MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),NA
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,1
CancerPDF_ID CancerPDF_ID659, CancerPDF_ID10557,
p-ValueNA,1.50E-26
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,NA
Length22,22
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Muscle-invasive bladder cancer
DatabaseNCBI refseq Protein Database,SwissProt Database
ModificationNA,NA
Number of Patients"42 normal, 28patients",751 bladder cancer and 127 control
RegulationNA,Upregulated in cancer vs normal
ValidationNA,Mann-Whitney tests and areas under receiver-operator characteristic
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,0.768
Peptide AtlasNA
IEDB