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Details of CancerPDF entry with Sequence GSPAINVAVHVF
Primary information
sequence IDSeq_3198
Peptide sequenceGSPAINVAVHVF
CancerPDF_ID CancerPDF_ID2109, CancerPDF_ID3200,
PMID21136997,21136997
Protein NameTransthyretin,Transthyretin
UniprotKB Entry NameTTHY_HUMAN,TTHY_HUMAN
FluidSerum,Plasma
M/Z1209.65061,1209.6506
Charge1,1
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC-MS-MS/MS
Quantification TechniqueLC-ESI-MS,LC-ESI-MS
Labelled/Label FreeLabel Free,Label Free
FDRNA,NA
CancerPDF_ID CancerPDF_ID2109, CancerPDF_ID3200,
p-ValueNA,NA
SoftwareMASCOT(v. 2.2.01),MASCOT(v. 2.2.01)
Length12,12
Cancer TypeColorectal cancer,Normal
DatabaseSwissProt Database,SwissProt Database
ModificationNA,NA
Number of Patients30 patients and 30 healthy controls,27 healthy individuals
RegulationNA,NA
ValidationLeave One out Cross validation,Leave One out Cross validation
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB