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Details of CancerPDF entry with Sequence GSGGGSYGSGGGGGGHGSY
Primary information
sequence IDSeq_3183
Peptide sequenceGSGGGSYGSGGGGGGHGSY
CancerPDF_ID CancerPDF_ID5290, CancerPDF_ID11514,
PMID24982608,26992070
Protein Name"Keratin, type II cytoskeletal 1","Keratin, type II cytoskeletal 1"
UniprotKB Entry NameK2C1_HUMAN,K2C1_HUMAN
FluidUrine,Serum
M/ZNA,NA
ChargeNA,NA
Mass (in Da)NA,1514.588182
fdrNA,NA
Profiling TechniqueNano-LC-MS,LC-MS
Peptide Identification techniqueMS/MS,LC-MS/MS
Quantification TechniqueNA,NA
Labelled/Label FreeLabel Free,Label Free
FDR0.01,FDR 1 %
CancerPDF_ID CancerPDF_ID5290, CancerPDF_ID11514,
p-ValueNA,NA
Software"GPM search engine, MASCOT",SEQUEST and Maxquant
Length19,19
Cancer TypeOvarian cancer,Melanoma
DatabaseIPI 3.71 Human Database ,SwissProt Database
ModificationNA,NA
Number of Patients6 Ovarian cancer patients and 6 normal individuals,8 cancer samples and 4 healthy samples
RegulationUniquely present in case of urine of ovarian cancer patients,"Present in 4 cancer samples out of 8 cancer samples. ,Present in 1 healthy samples out of 4 healthy samples."
ValidationNA,na
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB239759