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Details of CancerPDF entry with Sequence GPPDVPDHAAYHPF
Primary information
sequence IDSeq_2978
Peptide sequenceGPPDVPDHAAYHPF
CancerPDF_ID CancerPDF_ID47, CancerPDF_ID797, CancerPDF_ID3257,
PMID16896061,19795908,21267442
Protein NameInter-alpha-trypsin inhibitor heavy chain H5,Inter-alpha-trypsin inhibitor heavy chain H4,Inter-alpha-trypsin inhibitor heavy chain H4
UniprotKB Entry NameITIH4_HUMAN,ITIH4_HUMAN,ITIH4_HUMAN
FluidSerum,Plasma,Serum
M/Z1519.7,760.34,1520
Charge1,2,NA
Mass (in Da)1519.69,NA,NA
fdrNA,NA,NA
Profiling TechniqueMALDI-TOF,LC-MS,MALDI-TOF
Peptide Identification techniqueQ/TOF MS/MS,MALDI-TOF/TOF,LC-MS-MS/MS
Quantification TechniqueNA,LC-MRM (multiple reaction monitoring),LC-ESI-MS
Labelled/Label FreeLabel Free,Labelled,Label Free
FDRNA,less than 7%,NA
CancerPDF_ID CancerPDF_ID47, CancerPDF_ID797, CancerPDF_ID3257,
p-Value1.00E-05,NA,NA
SoftwareMASCOT,FlexAnalysis 3.0 and Biotools 3.0 software,NA
Length14,14,14
Cancer TypeMetastatic thyroid carcinomas,Ductal adenocarcinoma of the pancreas (DAP),Stomach adenocarcinoma
DatabaseNCBI refseq Protein Database,NCBI refseq Protein Database,NA
ModificationNA,NA,NA
Number of Patients40 metastatic thyroid carcinoma patients and 40 normal for training phase and 10 metastatic thyroid carcinoma and 10 normal individuals for independent validation,"42 normal, 28 patients",41 and 21 patients are in training dataset and testing dataset respectively; 21 and 12 Normal healthy individual s are in training dataset and testing dataset respectively
RegulationNA,NA,NA
ValidationIndependent validation,NA,Independent validation
Sensitivity95% on independent dataset,NA,NA
Specificity95% on independent dataset,NA,NA
AccuracyNA,NA,NA
Peptide AtlasNA
IEDB