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Details of CancerPDF entry with Sequence GDDGEAGKPGRPGERGPPGP
Primary information
sequence IDSeq_2538
Peptide sequenceGDDGEAGKPGRPGERGPPGP
CancerPDF_ID CancerPDF_ID10842, CancerPDF_ID10845,
PMID21805675,21805675
Protein NameCollagen alpha-1(I) chain,Collagen alpha-1(I) chain
UniprotKB Entry NameCO1A1_HUMAN,CO1A1_HUMAN
FluidUrine,Urine
M/Z1934.8887,1950.8771
ChargeNA,NA
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueMALDI-TOF,MALDI-TOF
Peptide Identification techniqueMALDI-TOF-MS,MALDI-TOF-MS
Quantification TechniqueNA,NA
Labelled/Label FreeLabel Free,Label Free
FDR1,1
CancerPDF_ID CancerPDF_ID10842, CancerPDF_ID10845,
p-ValueNA,NA
SoftwareNA,NA
Length20,20
Cancer TypeMuscle-invasive bladder cancer,Muscle-invasive bladder cancer
DatabaseSwissProt Database,SwissProt Database
Modification"Oxidation: 12, 20","Oxidation: 9, 12, 18"
Number of Patients751 bladder cancer and 127 control,751 bladder cancer and 127 control
RegulationDifferentially expressed between cancer vs normal samples,Differentially expressed between cancer vs normal samples
ValidationMann-Whitney tests and areas under receiver-operator characteristic,Mann-Whitney tests and areas under receiver-operator characteristic
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB