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Details of CancerPDF entry with Sequence EGDFLAEGGGV
Primary information
sequence IDSeq_1778
Peptide sequenceEGDFLAEGGGV
CancerPDF_ID CancerPDF_ID1210, CancerPDF_ID9656,
PMID21136997,21533267
Protein NameFibrinogen alpha,Fibrinogen alpha chain
UniprotKB Entry NameFIBA_HUMAN,FIBA_HUMAN
FluidSerum,Serum
M/Z1049.46655,525.73
Charge1,2
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC/MS/MS
Quantification TechniqueLC-ESI-MS,Multiple Reaction Monitoring
Labelled/Label FreeLabel Free,Label Free
FDRNA,1.49
CancerPDF_ID CancerPDF_ID1210, CancerPDF_ID9656,
p-ValueNA,2.99E-25
SoftwareMASCOT(v. 2.2.01),MASCOT
Length11,11
Cancer TypeColorectal cancer,Lung adenocarcinoma
DatabaseSwissProt Database,Swissprot Database (57.4)
ModificationNA,NA
Number of Patients30 patients and 30 healthy controls,62 lung adenocarcinoma and 30 healthy control
RegulationDifferentially expressed between cancer vs normal,Differentially expressed between Lung cancer vs control
ValidationLeave One out Cross validation,MRM-based validation of 19 candidates
Sensitivity0.898,NA
Specificity0.946,NA
AccuracyNA,0.665
Peptide AtlasNA
IEDB437539 462581