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Details of CancerPDF entry with Sequence EETKENEGFTVTAEG
Primary information
sequence IDSeq_1757
Peptide sequenceEETKENEGFTVTAEG
CancerPDF_ID CancerPDF_ID944, CancerPDF_ID8786, CancerPDF_ID9602,
PMID19795908,24694173,21533267
Protein NameComplement C3,Complement C3 (Fragment),Complement C3
UniprotKB Entry NameCO3_HUMAN,CO3_HUMAN,CO3_HUMAN
FluidPlasma,Ascites fluid,Serum
M/Z820.86,NA,820.86
Charge2,1,2
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,LTQ-Orbitrap XL,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,X tandem for peptide identification,LC/MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),NA,Multiple Reaction Monitoring
Labelled/Label FreeLabelled,Label Free,Label Free
FDRless than 7%,NA,1.49
CancerPDF_ID CancerPDF_ID944, CancerPDF_ID8786, CancerPDF_ID9602,
p-ValueNA,NA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,"X tandem for peptide identification,Scaffold 2 software for any modification analysis",MASCOT
Length15,15,15
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Ovarian cancer,Lung adenocarcinoma
DatabaseNCBI refseq Protein Database,IPI00783987,Swissprot Database (57.4)
ModificationNA,NA,NA
Number of Patients"42 normal, 28 patients",3 ovarian cancer patient and 3 non cancerous control,62 lung adenocarcinoma and 30 healthy control
RegulationNA,Uniquely expressed in ovarian cancer patient,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationNA,NA,MRM-based validation of 19 candidates
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasNA
IEDB