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Details of CancerPDF entry with Sequence DTNRASVGQDSPEPR
Primary information
sequence IDSeq_1577
Peptide sequenceDTNRASVGQDSPEPR
CancerPDF_ID CancerPDF_ID2087, CancerPDF_ID9860,
PMID21136997,21533267
Protein NamePlexin domain-containing protein 2,Plexin domain-containing protein 2
UniprotKB Entry NamePXDC2_HUMAN,PXDC2_HUMAN
FluidSerum,Serum
M/Z1627.75503,543.59
Charge1,3
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC/MS/MS
Quantification TechniqueLC-ESI-MS,Multiple Reaction Monitoring
Labelled/Label FreeLabel Free,Label Free
FDRNA,1.49
CancerPDF_ID CancerPDF_ID2087, CancerPDF_ID9860,
p-ValueNA,NA
SoftwareMASCOT(v. 2.2.01),MASCOT
Length15,15
Cancer TypeColorectal cancer,Lung adenocarcinoma
DatabaseSwissProt Database,Swissprot Database (57.4)
ModificationNA,NA
Number of Patients30 patients and 30 healthy controls,62 lung adenocarcinoma and 30 healthy control
RegulationNA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationLeave One out Cross validation,MRM-based validation of 19 candidates
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB