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Details of CancerPDF entry with Sequence DSHSLTTNIMEIL
Primary information
sequence IDSeq_1537
Peptide sequenceDSHSLTTNIMEIL
CancerPDF_ID CancerPDF_ID2314, CancerPDF_ID2315, CancerPDF_ID9733,
PMID21136997,21136997,21533267
Protein NameFibrinogen alpha,Fibrinogen alpha,Fibrinogen alpha chain
UniprotKB Entry NameFIBA_HUMAN,FIBA_HUMAN,FIBA_HUMAN
FluidPlasma,Plasma,Serum
M/Z1472.7181,1488.713,737.37
Charge1,1,2
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,LC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC-MS-MS/MS,LC/MS/MS
Quantification TechniqueLC-ESI-MS,LC-ESI-MS,Multiple Reaction Monitoring
Labelled/Label FreeLabel Free,Label Free,Label Free
FDRNA,NA,1.49
CancerPDF_ID CancerPDF_ID2314, CancerPDF_ID2315, CancerPDF_ID9733,
p-ValueNA,NA,NA
SoftwareMASCOT(v. 2.2.01),MASCOT(v. 2.2.01),MASCOT
Length13,13,13
Cancer TypeNormal,Normal,Lung adenocarcinoma
DatabaseSwissProt Database,SwissProt Database,Swissprot Database (57.4)
ModificationNA,Oxidation of Met,NA
Number of Patients27 healthy individuals,27 healthy individuals,62 lung adenocarcinoma and 30 healthy control
RegulationNA,NA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationLeave One out Cross validation,Leave One out Cross validation,MRM-based validation of 19 candidates
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasPeptideAtlas
IEDB