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Details of CancerPDF entry with Sequence DLEPTVIDEIR
Primary information
sequence IDSeq_1380
Peptide sequenceDLEPTVIDEIR
CancerPDF_ID CancerPDF_ID871, CancerPDF_ID9884,
PMID19795908,21533267
Protein NameTubulin alpha-4A chain,Tubulin alpha-4A chain
UniprotKB Entry NameTBA4A_HUMAN,TBA4A_HUMAN
FluidPlasma,Serum
M/Z650.34,650.35
Charge2,2
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC/MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),Multiple Reaction Monitoring
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,1.49
CancerPDF_ID CancerPDF_ID871, CancerPDF_ID9884,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT
Length11,11
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Lung adenocarcinoma
DatabaseNCBI refseq Protein Database,Swissprot Database (57.4)
ModificationNA,NA
Number of Patients"37 normal, 12 patients",62 lung adenocarcinoma and 30 healthy control
RegulationNA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationNA,MRM-based validation of 19 candidates
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB