Welcome to Sequence Card of Peptide


Details of CancerPDF entry with Sequence DGQPGPKGDQGEKGERGTPGIGGFpGPSGNDGSAGpPGpp
Primary information
sequence IDSeq_1300
Peptide sequenceDGQPGPKGDQGEKGERGTPGIGGFpGPSGNDGSAGpPGpp
CancerPDF_ID CancerPDF_ID3515,
PMID27026199
Protein NameCollagen alpha-1(VII) chain
UniprotKB Entry NameCOL7A1_HUMAN
FluidUrine
fdr3745.68
Profiling Technique"CE-MS, Micro-TOF-MS"
Peptide Identification techniqueMS-MS
Labelled/Label FreeLabel Free
CancerPDF_ID CancerPDF_ID3515,
p-Valueless than 0.05
SoftwareProteome Discoverer 1.2
Length40
Cancer TypeBladder cancer
DatabaseUniprot Human non-redundant Database
Modificationp:Hydroxy-Proline
Number of Patients451 for training (341 patients and 110 normal) and 270 for testing(168 primary UBC patients and 102 normal controls);
RegulationDifferentially expressed between primary UBC and normal individual
ValidationIndependent Validation
SensitivityFor testing dataset 91%
SpecificityFor testing dataset 68%
AccuracyFor testing dataset 76%
Peptide AtlasNA
IEDBNA