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Details of CancerPDF entry with Sequence DEAGSEADHEGTHST
Primary information
sequence IDSeq_1199
Peptide sequenceDEAGSEADHEGTHST
CancerPDF_ID CancerPDF_ID1238, CancerPDF_ID2324, CancerPDF_ID9677,
PMID21136997,21136997,21533267
Protein NameFibrinogen alpha,Fibrinogen alpha,Fibrinogen alpha chain
UniprotKB Entry NameFIBA_HUMAN,FIBA_HUMAN,FIBA_HUMAN
FluidSerum,Plasma,Serum
M/Z1541.58662,1541.5866,514.86
Charge1,1,3
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,LC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC-MS-MS/MS,LC/MS/MS
Quantification TechniqueLC-ESI-MS,LC-ESI-MS,Multiple Reaction Monitoring
Labelled/Label FreeLabel Free,Label Free,Label Free
FDR0.001,NA,1.49
CancerPDF_ID CancerPDF_ID1238, CancerPDF_ID2324, CancerPDF_ID9677,
p-Value5.64E-05,NA,NA
SoftwareMASCOT(v. 2.2.01),MASCOT(v. 2.2.01),MASCOT
Length15,15,15
Cancer TypeColorectal cancer,Normal,Lung adenocarcinoma
DatabaseSwissProt Database,SwissProt Database,Swissprot Database (57.4)
ModificationNA,NA,NA
Number of Patients30 patients and 30 healthy controls,27 healthy individuals,62 lung adenocarcinoma and 30 healthy control
RegulationDifferentially expressed between cancer vs normal,NA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationLeave One out Cross validation,Leave One out Cross validation,MRM-based validation of 19 candidates
Sensitivity0.898,NA,NA
Specificity0.946,NA,NA
Accuracy0.917,NA,NA
Peptide AtlasNA
IEDB