Primary information |
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sequence ID | Seq_198 |
Peptide sequence | ADSGEGDFLAEGGGV |
CancerPDF_ID | CancerPDF_ID634, CancerPDF_ID1233, CancerPDF_ID2307, CancerPDF_ID9670, |
PMID | 19795908,21136997,21136997,21533267 |
Protein Name | Fibrinogen alpha chain,Fibrinogen alpha,Fibrinogen alpha,Fibrinogen alpha chain |
UniprotKB Entry Name | FIBA_HUMAN,FIBA_HUMAN,FIBA_HUMAN,FIBA_HUMAN |
Fluid | Plasma,Serum,Plasma,Serum |
M/Z | 690.8,1379.5841,1379.5841,690.78 |
Charge | 2,1,1,2 |
Mass (in Da) | NA,NA,NA,NA |
fdr | NA,NA,NA,NA |
Profiling Technique | LC-MS,LC-MS,LC-MS,LC-MS |
Peptide Identification technique | MALDI-TOF/TOF,LC-MS-MS/MS,LC-MS-MS/MS,LC/MS/MS |
Quantification Technique | LC-MRM (multiple reaction monitoring),LC-ESI-MS,LC-ESI-MS,Multiple Reaction Monitoring |
Labelled/Label Free | Labelled,Label Free,Label Free,Label Free |
FDR | less than 7%,NA,NA,1.49 |
CancerPDF_ID | CancerPDF_ID634, CancerPDF_ID1233, CancerPDF_ID2307, CancerPDF_ID9670, |
p-Value | NA,NA,NA,NA |
Software | FlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01),MASCOT(v. 2.2.01),MASCOT |
Length | 15,15,15,15 |
Cancer Type | Ductal adenocarcinoma of the pancreas (DAP),Colorectal cancer,Normal,Lung adenocarcinoma |
Database | NCBI refseq Protein Database,SwissProt Database,SwissProt Database,Swissprot Database (57.4) |
Modification | NA,NA,NA,NA |
Number of Patients | "42 normal, 28patients",30 patients and 30 healthy controls,27 healthy individuals,62 lung adenocarcinoma and 30 healthy control |
Regulation | NA,NA,NA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal" |
Validation | NA,Leave One out Cross validation,Leave One out Cross validation,MRM-based validation of 19 candidates |
Sensitivity | NA,NA,NA,NA |
Specificity | NA,NA,NA,NA |
Accuracy | NA,NA,NA,NA |
Peptide Atlas | PeptideAtlas |
IEDB | |