1SJP Chaperone date Mar 04, 2004
title Mycobacterium Tuberculosis Chaperonin60.2
authors R.Qamra, S.C.Mande, Tb Structural Genomics Consortium (Tbsgc)
compound source
Molecule: 60 Kda Chaperonin 2
Chain: A, B
Fragment: Residues 42-539
Synonym: Chaperonin60
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_common: Bacteria
Gene: Rv0440
Expression_system: Escherichia Coli
Expression_system_common: Bacteria
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 1 21 1
R_factor 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.674 113.825 79.535 90.00 94.58 90.00
method X-Ray Diffractionresolution 3.20 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • nucleotide binding
  • protein binding
  • ATP binding
  • unfolded protein binding
  • protein folding
  • protein refolding
  • cellular protein metabolic p...
  • cell wall
  • Primary referenceCrystal structure of the 65-kilodalton heat shock protein, chaperonin 60.2, of Mycobacterium tuberculosis., Qamra R, Mande SC, J Bacteriol 2004 Dec;186(23):8105-13. PMID:15547284
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (1sjp.pdb1.gz) 134 Kb
  • CSU: Contacts of Structural Units for 1SJP
  • Likely Quarternary Molecular Structure file(s) for 1SJP
  • Structure Factors (128 Kb)
  • Retrieve 1SJP in mmCIF format [Save to disk]
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  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
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  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1SJP, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1sjpa3, region A:135-188,A:373-407 [Jmol] [rasmolscript] [script source]
        - Domain d1sjpa2, region A:189-372 [Jmol] [rasmolscript] [script source]
        - Domain d1sjpa1, region A:62-134,A:408-514 [Jmol] [rasmolscript] [script source]
        - Domain d1sjpb3, region B:135-188,B:373-407 [Jmol] [rasmolscript] [script source]
        - Domain d1sjpb2, region B:189-372 [Jmol] [rasmolscript] [script source]
        - Domain d1sjpb1, region B:62-134,B:408-514 [Jmol] [rasmolscript] [script source]
  • Fold representative 1sjp from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sjp_A] [1sjp_B]
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