1R88 Immune System date Oct 23, 2003
title The Crystal Structure Of Mycobacterium Tuberculosis Mpt51 (Fbpc1)
authors R.A.Wilson, W.N.Maughan, L.Kremer, G.S.Besra, K.Futterer
compound source
Molecule: Mpt51mpb51 Antigen
Chain: A, B
Synonym: Fibronectin-Binding Protein C1 (Fbpc1, Mpt51)
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_common: Bacteria
Gene: Fbpc1
Expression_system: Escherichia Coli
Expression_system_common: Bacteria
Expression_system_strain: C41(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet23b
symmetry Space Group: P 21 21 21
R_factor 0.189
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.900 108.900 109.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.71 Å
note 1R88 is a representative structure
similarity Belongs to the mycobacterial a85 antigen family.[Esterase]
subcellular loc. Secreted protein.
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • acyltransferase activity
  • transferase activity


  • Primary referenceThe structure of Mycobacterium tuberculosis MPT51 (FbpC1) defines a new family of non-catalytic alpha/beta hydrolases., Wilson RA, Maughan WN, Kremer L, Besra GS, Futterer K, J Mol Biol 2004 Jan 9;335(2):519-30. PMID:14672660
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (1r88.pdb1.gz) 48 Kb
  • Biological Unit Coordinates (1r88.pdb2.gz) 40 Kb
  • CSU: Contacts of Structural Units for 1R88
  • Likely Quarternary Molecular Structure file(s) for 1R88
  • Retrieve 1R88 in mmCIF format [Save to disk]
  • View 1R88 in 3D
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • On AstexViewer, from MSD-EBI (viewer documentation).
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  • GRASS (Graphical Representation and Analysis of Structure Server)
  • Cartoon representation from PDB Cartoon
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  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1R88, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1r88a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1r88b_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1r88 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1r88_B] [1r88_A]
  • Other resources with information on 1R88
  • InterPro: IPR000801
  • MMDB (Entrez's Structure Database)
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