1OUV Hydrolase date Mar 25, 2003
title Helicobacter Cysteine Rich Protein C (Hcpc)
authors P.R.Mittl, L.Luethy
compound source
Molecule: Conserved Hypothetical Secreted Protein
Chain: A
Synonym: Helicobacter Cysteine Rich Protein C, Hcpc
Engineered: Yes
Organism_scientific: Helicobacter Pylori
Organism_common: Bacteria
Strain: 26695
Gene: Hp1098
Expression_system: Escherichia Coli
Expression_system_common: Bacteria
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: T7
Expression_system_plasmid: Ptft74
symmetry Space Group: C 1 2 1
R_factor 0.202
crystal
cell
length a length b length c angle alpha angle beta angle gamma
102.982 46.198 76.390 90.00 120.95 90.00
method X-Ray Diffractionresolution 2.00 Å
note 1OUV is a representative structure
similarity Contains 7 tpr repeats. Belongs to the hcp beta-lactamase family.[TPR_1]
catalytic activ. A beta-lactam + h(2)o = a substituted beta- amino acid.
subcellular loc. Secreted protein (potential).
gene hcpC (H. pylori)
function May hydrolyze 6-aminopenicillinic acid and 7- aminocephalosporanic acid (aca) derivatives (by similarity).
Gene
Ontology
ChainFunctionProcessComponent
A
  • binding
  • beta-lactamase activity
  • hydrolase activity
  • response to antibiotic

  • Primary referenceThe Crystal Structure of Helicobacter Cysteine-rich Protein C at 2.0A Resolution: Similar Peptide-binding Sites in TPR and SEL1-like Repeat Proteins., Luthy L, Grutter MG, Mittl PR, J Mol Biol 2004 Jul 16;340(4):829-41. PMID:15223324
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (1ouv.pdb1.gz) 45 Kb
  • CSU: Contacts of Structural Units for 1OUV
  • Likely Quarternary Molecular Structure file(s) for 1OUV
  • Structure Factors (222 Kb)
  • Retrieve 1OUV in mmCIF format [Save to disk]
  • View 1OUV in 3D
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • On AstexViewer, from MSD-EBI (viewer documentation).
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  • Visual 3D analysis of 1OUV
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  • GRASS (Graphical Representation and Analysis of Structure Server)
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1OUV, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ouva_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1ouv from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ouv_A]
  • Other resources with information on 1OUV
  • InterPro: IPR001440 , IPR011990 , IPR006597
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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