1JL5 | Toxin | date | Jul 15, 2001 ![]() ![]() |
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title | Novel Molecular Architecture Of Yopm-A Leucine-Rich Effector Protein From Yersinia Pestis | ||||||||||||||
authors | A.G.Evdokimov, D.E.Anderson, K.M.Routzahn, D.S.Waugh | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Outer Protein Yopm Chain: A Engineered: Yes |
Organism_scientific: Yersinia Pestis Organism_common: Bacteria Gene: Yopm Expression_system: Escherichia Coli Expression_system_common: Bacteria Expression_system_strain: Bl21de3 Expression_system_vector_type: Modified Pmal | ||||||||||||||
symmetry | Space Group: I 41 2 2 | R_factor | 0.220 | ||||||||||||
crystal cell |
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method | X-Ray Diffraction | resolution | 2.10 Å | ||||||||||||
ligand | CA | enzyme |
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note | 1JL5 is a representative structure | ||||||||||||||
related structures | by homologous chain: 1G9U | ||||||||||||||
similarity | Contains 15 lrr (leucine-rich) repeats.[LRR_1] | ||||||||||||||
subunit | Homotetramer forming a hollow cylinder with an inner diameter of approximately 35 angstroms. | ||||||||||||||
subcellular loc. | Outer membrane and secreted. | ||||||||||||||
Genes | Y0059, Y5054, YOP48, YOPM, YPCD1.26C (Y. pestis); YP (Y. pestis) | ||||||||||||||
Gene Ontology |
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Primary reference | Unusual molecular architecture of the Yersinia pestis cytotoxin YopM: a leucine-rich repeat protein with the shortest repeating unit., Evdokimov AG, Anderson DE, Routzahn KM, Waugh DS, J Mol Biol 2001 Sep 28;312(4):807-21. PMID:11575934 |
Data retrieval |
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View 1JL5 in 3D |
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Visual 3D analysis of 1JL5 |
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Structure-derived information |
- Domain d1jl5a_, region A [Jmol] [rasmolscript] [script source] |
Sequence-derived information |
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