1AMX	Bacterial Adhesin	date	Jun 19, 1997
title	Collagen-Binding Domain From A Staphylococcus Aureus Adhesin
authors	J.Symersky, S.Narayana
compound		source
Molecule: Collagen Adhesin Chain: A Fragment: Cbd (151 - 318) Synonym: Cbd19 Engineered: Yes Other_details: A 19-Kda Fragment Of The Collagen-Binding Adhesin From A Staphylococcus Aureus (His-Tag + Residues 151-318)		Organism_scientific: Staphylococcus Aureus Gene: Cna Expression_system: Escherichia Coli Expression_system_strain: Jm101 Expression_system_cellular_location: Cytoplasm Expression_system_vector_type: Plasmid Expression_system_vector: Pqe-30 Expression_system_plasmid: Pqe504 Expression_system_gene: Cna
symmetry	Space Group: P 32 2 1	R_factor	0.200
crystal cell	length a length b length c angle alpha angle beta angle gamma 74.000 74.000 56.700 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.00 Å
note	1AMX is a representative structure
similarity	Belongs to the Collagen_bind family.
subcellular loc.	Attached to the cell wall peptidoglycan by an amide bond (potential).
Gene	CNA (S. aureus)
function	Mediates attachment of staphyococcal cells to collagen- containing substrata.
Gene Ontology	Chain Function Process Component A binding collagen binding cell wall cell surface
Primary reference	Structure of the collagen-binding domain from a Staphylococcus aureus adhesin., Symersky J, Patti JM, Carson M, House-Pompeo K, Teale M, Moore D, Jin L, Schneider A, DeLucas LJ, Hook M, Narayana SV, Nat Struct Biol 1997 Oct;4(10):833-8. PMID:9334749

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk] Biological Unit Coordinates (1amx.pdb1.gz) 36 Kb CSU: Contacts of Structural Units for 1AMX Likely Quarternary Molecular Structure file(s) for 1AMX Structure Factors (96 Kb) Retrieve 1AMX in mmCIF format [Save to disk]

View 1AMX in 3D

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Visual 3D analysis of 1AMX

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 1AMX, from MSDmotif at EBI Genome occurence of 1AMX's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1amx__, region [Jmol] [rasmolscript] [script source] Fold representative 1amx from FSSP and Dali (Families of Structurally Similar Proteins) Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1amx_A]

Other resources with information on 1AMX

InterPro: IPR001899 , IPR008456 , IPR008454 PDBREPORT (protein verification by WHAT_CHECK procedures) MMDB (Entrez's Structure Database)

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