EbolaVCR: Computational resources for designing drugs and vaccines against EBOLA virus

Welcome to Home page of EbolaVCR

Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.

Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.

Strain	Gene	mRNA	siRNA	Position	Efficacy
Result
NC_004161.1	VP40	GAAGCUACAGUGAAUGUAA	UUACAUUCACUGUAGCUUC	226	1.133364
NC_004161.1	VP40	GGACAUGCUUCAGACUUAA	UUAAGUCUGAAGCAUGUCC	676	1.131273
NC_004161.1	VP40	GACCAAGUGUCAUAGUCAA	UUGACUAUGACACUUGGUC	77	1.125936
NC_004161.1	VP40	AGACAGGAAAGAAAGGACA	UGUCCUUUCUUUCCUGUCU	662	1.081234
NC_004161.1	VP40	AGGACAUGCUUCAGACUUA	UAAGUCUGAAGCAUGUCCU	675	1.061668
NC_004161.1	VP40	CAAUUAUGUUGGCUUCCUA	UAGGAAGCCAACAUAAUUG	341	1.057767
NC_004161.1	VP40	CUGACAAGAUUCAAACAAU	AUUGUUUGAAUCUUGUCAG	701	1.057548
NC_004161.1	VP40	CGACCAAGUGUCAUAGUCA	UGACUAUGACACUUGGUCG	76	1.038244
NC_004161.1	VP40	CAAGUGUCAUAGUCAAUGA	UCAUUGACUAUGACACUUG	80	1.022016
NC_004161.1	VP40	GGGGAAGACAGGAAAGAAA	UUUCUUUCCUGUCUUCCCC	657	1.019970
NC_004161.1	VP40	GACAAGAUUCAAACAAUCA	UGAUUGUUUGAAUCUUGUC	703	1.013401
NC_004161.1	VP40	GGAAAGAAAGGACAUGCUU	AAGCAUGUCCUUUCUUUCC	667	1.011727
NC_004161.1	VP40	CAGACUUAACAUCACCUGA	UCAGGUGAUGUUAAGUCUG	686	1.010391
NC_004161.1	VP40	CGAAAUAUGUUGGACUUGA	UCAAGUCCAACAUAUUUCG	869	1.009429
NC_004161.1	VP40	GUAGCUGAUCAGAAGAUAU	AUAUCUUCUGAUCAGCUAC	298	1.008396
NC_004161.1	VP40	GCCUUUAUAUUGGAAGCUA	UAGCUUCCAAUAUAAAGGC	214	1.006945
NC_004161.1	VP40	GGAAGCUACAGUGAAUGUA	UACAUUCACUGUAGCUUCC	225	1.004506
NC_004161.1	VP40	CCAGAAUUACUAGUUCAAA	UUUGAACUAGUAAUUCUGG	790	1.004372
NC_004161.1	VP40	GGUGUAGCUGAUCAGAAGA	UCUUCUGAUCAGCUACACC	295	0.999779
NC_004161.1	VP40	CCUCCAGCAUAUAAUGAUA	UAUCAUUAUAUGCUGGAGG	28	0.994574
NC_004161.1	VP40	GCAUAUAAUGAUAUUGCAU	AUGCAAUAUCAUUAUAUGC	34	0.994071
NC_004161.1	VP40	CCUGACAAGAUUCAAACAA	UUGUUUGAAUCUUGUCAGG	700	0.992122
NC_004161.1	VP40	CGGCUCCUCCAGCAUAUAA	UUAUAUGCUGGAGGAGCCG	23	0.979259
NC_004161.1	VP40	CCUCAAAAUUGUCCCGAUU	AAUCGGGACAAUUUUGAGG	738	0.977023
NC_004161.1	VP40	AUGCAAUACCGGACCUCAA	UUGAGGUCCGGUAUUGCAU	725	0.970604
NC_004161.1	VP40	CCCAGUAUUUCACAUUUGA	UCAAAUGUGAAAUACUGGG	506	0.969779
NC_004161.1	VP40	CGGAGUAGCUUCUGCCUUU	AAAGGCAGAAGCUACUCCG	201	0.969128
NC_004161.1	VP40	CACCCAGGAUUGUGAUUCA	UGAAUCACAAUCCUGGGUG	921	0.968997
NC_004161.1	VP40	GAUAACAUUGAUCACUCAA	UUGAGUGAUCAAUGUUAUC	169	0.968460
NC_004161.1	VP40	GGCAUUCCUUCAAGAGUUU	AAACUCUUGAAGGAAUGCC	465	0.967867
NC_004161.1	VP40	GACUCCUAAGGUUGGGCAA	UUGCCCAACCUUAGGAGUC	443	0.965005
NC_004161.1	VP40	CUUUAUAUUGGAAGCUACA	UGUAGCUUCCAAUAUAAAG	216	0.964685
NC_004161.1	VP40	CAAACAAUCAUGAAUGCAA	UUGCAUUCAUGAUUGUUUG	712	0.964167
NC_004161.1	VP40	GACUUAACAUCACCUGACA	UGUCAGGUGAUGUUAAGUC	688	0.964129
NC_004161.1	VP40	UCACCUGACAAGAUUCAAA	UUUGAAUCUUGUCAGGUGA	697	0.963376
NC_004161.1	VP40	UCCAGAAUUACUAGUUCAA	UUGAACUAGUAAUUCUGGA	789	0.962471
NC_004161.1	VP40	GGGCAGAUGUUCCAUCAAA	UUUGAUGGAACAUCUGCCC	128	0.962015
NC_004161.1	VP40	CUCUAAAGCUCAUCACUCA	UGAGUGAUGAGCUUUAGAG	533	0.961604
NC_004161.1	VP40	ACCAAGUGUCAUAGUCAAU	AUUGACUAUGACACUUGGU	78	0.957853
NC_004161.1	VP40	GACCAGUGGCUGAUGAUAA	UUAUCAUCAGCCACUGGUC	155	0.954297
NC_004161.1	VP40	CUAACAGCUCUAAAGCUCA	UGAGCUUUAGAGCUGUUAG	526	0.954233
NC_004161.1	VP40	CCUUCAAGAGUUUGUUCUU	AAGAACAAACUCUUGAAGG	471	0.953512
NC_004161.1	VP40	GGAGUAGCUUCUGCCUUUA	UAAAGGCAGAAGCUACUCC	202	0.949116
NC_004161.1	VP40	GAGUAGCUUCUGCCUUUAU	AUAAAGGCAGAAGCUACUC	203	0.948480
NC_004161.1	VP40	CUAUGGUUAUCACCCAGGA	UCCUGGGUGAUAACCAUAG	911	0.942945
NC_004161.1	VP40	AGCAUAUAAUGAUAUUGCA	UGCAAUAUCAUUAUAUGCU	33	0.941891
NC_004161.1	VP40	AAUUGAGGUUCCAGAAUUA	UAAUUCUGGAACCUCAAUU	780	0.940276
NC_004161.1	VP40	GCUGAUCAGAAGAUAUACA	UGUAUAUCUUCUGAUCAGC	301	0.939085
NC_004161.1	VP40	GAUAUUGCAUACCCUAUGA	UCAUAGGGUAUGCAAUAUC	43	0.936559
NC_004161.1	VP40	ACAAGAUUCAAACAAUCAU	AUGAUUGUUUGAAUCUUGU	704	0.932870
NC_004161.1	VP40	GAAGAUAUACAGCUUUGAU	AUCAAAGCUGUAUAUCUUC	309	0.930052
NC_004161.1	VP40	AGAACAUAGUUGGAAUUGA	UCAAUUCCAACUAUGUUCU	767	0.928615
NC_004161.1	VP40	UAUUGGAAGCUACAGUGAA	UUCACUGUAGCUUCCAAUA	221	0.928582
NC_004161.1	VP40	AGAAAGGACAUGCUUCAGA	UCUGAAGCAUGUCCUUUCU	671	0.928055
NC_004161.1	VP40	GACAGGAAAGAAAGGACAU	AUGUCCUUUCUUUCCUGUC	663	0.927735
NC_004161.1	VP40	CAGCUUCCCCAGUAUUUCA	UGAAAUACUGGGGAAGCUG	499	0.927038
NC_004161.1	VP40	CCAUGAGACCAGUGGCUGA	UCAGCCACUGGUCUCAUGG	149	0.924560
NC_004161.1	VP40	AGGCGCGGAGUGUUACCAA	UUGGUAACACUCCGCGCCU	4	0.924456
NC_004161.1	VP40	CGCUGGUACGUGUCAACAG	CUGUUGACACGUACCAGCG	392	0.924361
NC_004161.1	VP40	CCAAGAACAUAGUUGGAAU	AUUCCAACUAUGUUCUUGG	764	0.922978
NC_004161.1	VP40	GGCUCCUCCAGCAUAUAAU	AUUAUAUGCUGGAGGAGCC	24	0.922940
NC_004161.1	VP40	GGGGCAGAUGUUCCAUCAA	UUGAUGGAACAUCUGCCCC	127	0.922696
NC_004161.1	VP40	GGCUCUCACUCCAUCCCAA	UUGGGAUGGAGUGAGAGCC	617	0.922388
NC_004161.1	VP40	CAAUCAGGCAUUCCUUCAA	UUGAAGGAAUGCCUGAUUG	459	0.921401
NC_004161.1	VP40	UGCAAUACCGGACCUCAAA	UUUGAGGUCCGGUAUUGCA	726	0.921029
NC_004161.1	VP40	GCAAUACCGGACCUCAAAA	UUUUGAGGUCCGGUAUUGC	727	0.919638
NC_004161.1	VP40	GGAACAAAAGUCCUGAUGA	UCAUCAGGACUUUUGUUCC	250	0.919427
NC_004161.1	VP40	AAUGAUAUUGCAUACCCUA	UAGGGUAUGCAAUAUCAUU	40	0.917379
NC_004161.1	VP40	CAUCACCUGACAAGAUUCA	UGAAUCUUGUCAGGUGAUG	695	0.916129
NC_004161.1	VP40	AGAAGAUAUACAGCUUUGA	UCAAAGCUGUAUAUCUUCU	308	0.915424
NC_004161.1	VP40	UCUAAAGCUCAUCACUCAA	UUGAGUGAUGAGCUUUAGA	534	0.914036
NC_004161.1	VP40	AGUAGCUUCUGCCUUUAUA	UAUAAAGGCAGAAGCUACU	204	0.913294
NC_004161.1	VP40	AGUGGCUGAUGAUAACAUU	AAUGUUAUCAUCAGCCACU	159	0.910863
NC_004161.1	VP40	AUAUUGGAAGCUACAGUGA	UCACUGUAGCUUCCAAUAU	220	0.910476
NC_004161.1	VP40	GAAUUGAGGUUCCAGAAUU	AAUUCUGGAACCUCAAUUC	779	0.910331
NC_004161.1	VP40	UACCGGACCUCAAAAUUGU	ACAAUUUUGAGGUCCGGUA	731	0.910235
NC_004161.1	VP40	GGGAAGACAGGAAAGAAAG	CUUUCUUUCCUGUCUUCCC	658	0.910072
NC_004161.1	VP40	AUCACCUGACAAGAUUCAA	UUGAAUCUUGUCAGGUGAU	696	0.909647
NC_004161.1	VP40	UGAUAACAUUGAUCACUCA	UGAGUGAUCAAUGUUAUCA	168	0.908135
NC_004161.1	VP40	AAAGAAAGGACAUGCUUCA	UGAAGCAUGUCCUUUCUUU	669	0.907803
NC_004161.1	VP40	GAUUCAAACAAUCAUGAAU	AUUCAUGAUUGUUUGAAUC	708	0.907038
NC_004161.1	VP40	CAUGCUUCAGACUUAACAU	AUGUUAAGUCUGAAGCAUG	679	0.905278
NC_004161.1	VP40	AGUUCUUCUUCCGAAAUAU	AUAUUUCGGAAGAAGAACU	858	0.905215
NC_004161.1	VP40	AGGAAAGAAAGGACAUGCU	AGCAUGUCCUUUCUUUCCU	666	0.904769
NC_004161.1	VP40	CACUGGGUGUAGCUGAUCA	UGAUCAGCUACACCCAGUG	290	0.904645
NC_004161.1	VP40	CCUAUGAGCAUACUCCCAA	UUGGGAGUAUGCUCAUAGG	55	0.904044
NC_004161.1	VP40	GAUAUACAGCUUUGAUUCA	UGAAUCAAAGCUGUAUAUC	312	0.901672
NC_004161.1	VP40	GGGUGUAGCUGAUCAGAAG	CUUCUGAUCAGCUACACCC	294	0.900208
NC_004161.1	VP40	AACCCGACCAAGUGUCAUA	UAUGACACUUGGUCGGGUU	72	0.898874
NC_004161.1	VP40	GGCGCGGAGUGUUACCAAC	GUUGGUAACACUCCGCGCC	5	0.897702
NC_004161.1	VP40	CAUAGUUGGAAUUGAGGUU	AACCUCAAUUCCAACUAUG	771	0.896951
NC_004161.1	VP40	CCGCUGGUACGUGUCAACA	UGUUGACACGUACCAGCGG	391	0.896620
NC_004161.1	VP40	AGUGUCAUAGUCAAUGAGA	UCUCAUUGACUAUGACACU	82	0.895909
NC_004161.1	VP40	CGGGAACAAAAGUCCUGAU	AUCAGGACUUUUGUUCCCG	248	0.895845
NC_004161.1	VP40	ACCUGACAAGAUUCAAACA	UGUUUGAAUCUUGUCAGGU	699	0.894836
NC_004161.1	VP40	AGGCAUUCCUUCAAGAGUU	AACUCUUGAAGGAAUGCCU	464	0.894600
NC_004161.1	VP40	ACCAAUUAUUCCAGUUCUU	AAGAACUGGAAUAAUUGGU	846	0.894027
NC_004161.1	VP40	GGAAUUGAGGUUCCAGAAU	AUUCUGGAACCUCAAUUCC	778	0.892234
NC_004161.1	VP40	CAAGAACAUAGUUGGAAUU	AAUUCCAACUAUGUUCUUG	765	0.892178
NC_004161.1	VP40	CCUUUAUAUUGGAAGCUAC	GUAGCUUCCAAUAUAAAGG	215	0.892119
NC_004161.1	VP40	CCCUAUGAGCAUACUCCCA	UGGGAGUAUGCUCAUAGGG	54	0.891392
NC_004161.1	VP40	CAGAAUUACUAGUUCAAAG	CUUUGAACUAGUAAUUCUG	791	0.891102
NC_004161.1	VP40	AUGAUAUUGCAUACCCUAU	AUAGGGUAUGCAAUAUCAU	41	0.890216
NC_004161.1	VP40	AGAGUUUGUUCUUCCACCA	UGGUGGAAGAACAAACUCU	477	0.888818
NC_004161.1	VP40	UUCCAGAAUUACUAGUUCA	UGAACUAGUAAUUCUGGAA	788	0.888608
NC_004161.1	VP40	AGUUGGAAUUGAGGUUCCA	UGGAACCUCAAUUCCAACU	774	0.886621
NC_004161.1	VP40	CAUUUGAUCUAACAGCUCU	AGAGCUGUUAGAUCAAAUG	518	0.884897
NC_004161.1	VP40	GCCGCAAUUAUGUUGGCUU	AAGCCAACAUAAUUGCGGC	337	0.884767
NC_004161.1	VP40	AUUUGAUCUAACAGCUCUA	UAGAGCUGUUAGAUCAAAU	519	0.883188
NC_004161.1	VP40	CAAAAUUGUCCCGAUUGAU	AUCAAUCGGGACAAUUUUG	741	0.882997
NC_004161.1	VP40	AAACAAUCAUGAAUGCAAU	AUUGCAUUCAUGAUUGUUU	713	0.882068
NC_004161.1	VP40	AGAUUCAAACAAUCAUGAA	UUCAUGAUUGUUUGAAUCU	707	0.881757
NC_004161.1	VP40	UAGCUGAUCAGAAGAUAUA	UAUAUCUUCUGAUCAGCUA	299	0.879838
NC_004161.1	VP40	ACCCGCUGGUACGUGUCAA	UUGACACGUACCAGCGGGU	389	0.879625
NC_004161.1	VP40	GUACGUGUCAACAGGCUAG	CUAGCCUGUUGACACGUAC	397	0.879229
NC_004161.1	VP40	CCAACCCGACCAAGUGUCA	UGACACUUGGUCGGGUUGG	70	0.878709
NC_004161.1	VP40	AUAUACAGCUUUGAUUCAA	UUGAAUCAAAGCUGUAUAU	313	0.877419
NC_004161.1	VP40	CGGGGAAGACAGGAAAGAA	UUCUUUCCUGUCUUCCCCG	656	0.877309
NC_004161.1	VP40	ACUUAACAUCACCUGACAA	UUGUCAGGUGAUGUUAAGU	689	0.876523
NC_004161.1	VP40	CAGAAGAUAUACAGCUUUG	CAAAGCUGUAUAUCUUCUG	307	0.875483
NC_004161.1	VP40	CAAAAAACCACAACCCAAA	UUUGGGUUGUGGUUUUUUG	819	0.874417
NC_004161.1	VP40	GCAAUCAGGCAUUCCUUCA	UGAAGGAAUGCCUGAUUGC	458	0.873176
NC_004161.1	VP40	UCAUGAAUGCAAUACCGGA	UCCGGUAUUGCAUUCAUGA	719	0.872707
NC_004161.1	VP40	GCUUCAGACUUAACAUCAC	GUGAUGUUAAGUCUGAAGC	682	0.871957
NC_004161.1	VP40	GCAAUUAUGUUGGCUUCCU	AGGAAGCCAACAUAAUUGC	340	0.871305
NC_004161.1	VP40	ACCUCAAAAUUGUCCCGAU	AUCGGGACAAUUUUGAGGU	737	0.871188
NC_004161.1	VP40	CAGUGGCUGAUGAUAACAU	AUGUUAUCAUCAGCCACUG	158	0.871108
NC_004161.1	VP40	ACCCAGGAUUGUGAUUCAU	AUGAAUCACAAUCCUGGGU	922	0.870666
NC_004161.1	VP40	AUCAGAAGAUAUACAGCUU	AAGCUGUAUAUCUUCUGAU	305	0.869085
NC_004161.1	VP40	UGUAGCUGAUCAGAAGAUA	UAUCUUCUGAUCAGCUACA	297	0.867291
NC_004161.1	VP40	CAAUACCGGACCUCAAAAU	AUUUUGAGGUCCGGUAUUG	728	0.864586
NC_004161.1	VP40	ACAUGCUUCAGACUUAACA	UGUUAAGUCUGAAGCAUGU	678	0.864347
NC_004161.1	VP40	CGUAUCACAUGGACAAGCA	UGCUUGUCCAUGUGAUACG	962	0.864271
NC_004161.1	VP40	AGUCCAGCUUCCCCAGUAU	AUACUGGGGAAGCUGGACU	495	0.863892
NC_004161.1	VP40	CAACAACAGCCGCAAUUAU	AUAAUUGCGGCUGUUGUUG	329	0.861762
NC_004161.1	VP40	GAUUGUGAUUCAUGCCACU	AGUGGCAUGAAUCACAAUC	928	0.861373
NC_004161.1	VP40	GGUUAUCACCCAGGAUUGU	ACAAUCCUGGGUGAUAACC	915	0.860728
NC_004161.1	VP40	GAACAUAGUUGGAAUUGAG	CUCAAUUCCAACUAUGUUC	768	0.860052
NC_004161.1	VP40	UCAAGAGUUUGUUCUUCCA	UGGAAGAACAAACUCUUGA	474	0.860046
NC_004161.1	VP40	AGACCAGUGGCUGAUGAUA	UAUCAUCAGCCACUGGUCU	154	0.860034
NC_004161.1	VP40	GCAAAAAACCACAACCCAA	UUGGGUUGUGGUUUUUUGC	818	0.859693
NC_004161.1	VP40	GAAGACAGGAAAGAAAGGA	UCCUUUCUUUCCUGUCUUC	660	0.858528
NC_004161.1	VP40	UGCUUCAGACUUAACAUCA	UGAUGUUAAGUCUGAAGCA	681	0.858480
NC_004161.1	VP40	CUCCAGCAUAUAAUGAUAU	AUAUCAUUAUAUGCUGGAG	29	0.858377
NC_004161.1	VP40	GGGCAAUCAGGCAUUCCUU	AAGGAAUGCCUGAUUGCCC	456	0.857322
NC_004161.1	VP40	CUCACUCCAUCCCAAGCUU	AAGCUUGGGAUGGAGUGAG	621	0.856768
NC_004161.1	VP40	CCAGUGGCUGAUGAUAACA	UGUUAUCAUCAGCCACUGG	157	0.856613
NC_004161.1	VP40	UCAAAAUUGUCCCGAUUGA	UCAAUCGGGACAAUUUUGA	740	0.856218
NC_004161.1	VP40	GUGUAGCUGAUCAGAAGAU	AUCUUCUGAUCAGCUACAC	296	0.855547
NC_004161.1	VP40	UCCGAAAUAUGUUGGACUU	AAGUCCAACAUAUUUCGGA	867	0.854273
NC_004161.1	VP40	CCGCAAUUAUGUUGGCUUC	GAAGCCAACAUAAUUGCGG	338	0.850961
NC_004161.1	VP40	CGGAGUGUUACCAACGGCU	AGCCGUUGGUAACACUCCG	9	0.850885
NC_004161.1	VP40	ACGGCUCCUCCAGCAUAUA	UAUAUGCUGGAGGAGCCGU	22	0.850622
NC_004161.1	VP40	UCCUAAGGUUGGGCAAUCA	UGAUUGCCCAACCUUAGGA	446	0.850509
NC_004161.1	VP40	UGACCGGCAAAAAACCACA	UGUGGUUUUUUGCCGGUCA	812	0.850283
NC_004161.1	VP40	GAGCAUACUCCCAACCCGA	UCGGGUUGGGAGUAUGCUC	60	0.848532
NC_004161.1	VP40	AAUGCAAUACCGGACCUCA	UGAGGUCCGGUAUUGCAUU	724	0.847912
NC_004161.1	VP40	CAUUCCUUCAAGAGUUUGU	ACAAACUCUUGAAGGAAUG	467	0.845821
NC_004161.1	VP40	CAACCCGACCAAGUGUCAU	AUGACACUUGGUCGGGUUG	71	0.845353
NC_004161.1	VP40	UAACAGCUCUAAAGCUCAU	AUGAGCUUUAGAGCUGUUA	527	0.844301
NC_004161.1	VP40	CCAGUAUUUCACAUUUGAU	AUCAAAUGUGAAAUACUGG	507	0.844070
NC_004161.1	VP40	CACAUUUGAUCUAACAGCU	AGCUGUUAGAUCAAAUGUG	516	0.843839
NC_004161.1	VP40	CCUAAGGUUGGGCAAUCAG	CUGAUUGCCCAACCUUAGG	447	0.843795
NC_004161.1	VP40	AGUGCCAGGGGCAGAUGUU	AACAUCUGCCCCUGGCACU	120	0.843736
NC_004161.1	VP40	GAGACCAGUGGCUGAUGAU	AUCAUCAGCCACUGGUCUC	153	0.843593
NC_004161.1	VP40	UACAGCUUUGAUUCAACAA	UUGUUGAAUCAAAGCUGUA	316	0.842455
NC_004161.1	VP40	AAGGCUGACCGGCAAAAAA	UUUUUUGCCGGUCAGCCUU	807	0.841969
NC_004161.1	VP40	GAUUCAACAACAGCCGCAA	UUGCGGCUGUUGUUGAAUC	325	0.841667
NC_004161.1	VP40	CAACCAUUGCCAGCUGCAA	UUGCAGCUGGCAAUGGUUG	550	0.841168
NC_004161.1	VP40	GUCCAGCUUCCCCAGUAUU	AAUACUGGGGAAGCUGGAC	496	0.840804
NC_004161.1	VP40	CAACGGCUCCUCCAGCAUA	UAUGCUGGAGGAGCCGUUG	20	0.840763
NC_004161.1	VP40	AUUGGAAGCUACAGUGAAU	AUUCACUGUAGCUUCCAAU	222	0.840595
NC_004161.1	VP40	GACAUGCUUCAGACUUAAC	GUUAAGUCUGAAGCAUGUC	677	0.839577
NC_004161.1	VP40	GAUCAGAAGAUAUACAGCU	AGCUGUAUAUCUUCUGAUC	304	0.839342
NC_004161.1	VP40	GGAGUGUUACCAACGGCUC	GAGCCGUUGGUAACACUCC	10	0.839271
NC_004161.1	VP40	ACAGCUCUAAAGCUCAUCA	UGAUGAGCUUUAGAGCUGU	529	0.839036
NC_004161.1	VP40	AGGGGCAGAUGUUCCAUCA	UGAUGGAACAUCUGCCCCU	126	0.838590
NC_004161.1	VP40	AACAUCACCUGACAAGAUU	AAUCUUGUCAGGUGAUGUU	693	0.838370
NC_004161.1	VP40	GUAGCUUCUGCCUUUAUAU	AUAUAAAGGCAGAAGCUAC	205	0.837728
NC_004161.1	VP40	UGGAAUUGAGGUUCCAGAA	UUCUGGAACCUCAAUUCCA	777	0.837398
NC_004161.1	VP40	UGGAAGCUACAGUGAAUGU	ACAUUCACUGUAGCUUCCA	224	0.836340
NC_004161.1	VP40	GUGUCAUAGUCAAUGAGAC	GUCUCAUUGACUAUGACAC	83	0.836213
NC_004161.1	VP40	UGGCUGAUGAUAACAUUGA	UCAAUGUUAUCAUCAGCCA	161	0.836029
NC_004161.1	VP40	GCCGGGGAAGACAGGAAAG	CUUUCCUGUCUUCCCCGGC	654	0.835908
NC_004161.1	VP40	AAGGACAUGCUUCAGACUU	AAGUCUGAAGCAUGUCCUU	674	0.835381
NC_004161.1	VP40	CAUAUAAUGAUAUUGCAUA	UAUGCAAUAUCAUUAUAUG	35	0.835314
NC_004161.1	VP40	CAAGAUUCAAACAAUCAUG	CAUGAUUGUUUGAAUCUUG	705	0.834635
NC_004161.1	VP40	CGCGGAGUGUUACCAACGG	CCGUUGGUAACACUCCGCG	7	0.834341
NC_004161.1	VP40	GUAUUUCACAUUUGAUCUA	UAGAUCAAAUGUGAAAUAC	510	0.833096
NC_004161.1	VP40	GACCGGCAAAAAACCACAA	UUGUGGUUUUUUGCCGGUC	813	0.832814
NC_004161.1	VP40	GAAAGGACAUGCUUCAGAC	GUCUGAAGCAUGUCCUUUC	672	0.831662
NC_004161.1	VP40	AGGAUUGUGAUUCAUGCCA	UGGCAUGAAUCACAAUCCU	926	0.829787
NC_004161.1	VP40	CCAAAAAUGGCCAACCAAU	AUUGGUUGGCCAUUUUUGG	833	0.829057
NC_004161.1	VP40	AAUUGUCCCGAUUGAUCCA	UGGAUCAAUCGGGACAAUU	744	0.829013
NC_004161.1	VP40	UUUGAUCUAACAGCUCUAA	UUAGAGCUGUUAGAUCAAA	520	0.827132
NC_004161.1	VP40	CUCCUCCAGCAUAUAAUGA	UCAUUAUAUGCUGGAGGAG	26	0.826904
NC_004161.1	VP40	AAUUACUAGUUCAAAGGCU	AGCCUUUGAACUAGUAAUU	794	0.826712
NC_004161.1	VP40	UUACUAGUUCAAAGGCUGA	UCAGCCUUUGAACUAGUAA	796	0.826259
NC_004161.1	VP40	CUGCCGGGGAAGACAGGAA	UUCCUGUCUUCCCCGGCAG	652	0.826146
NC_004161.1	VP40	GUGGCUGAUGAUAACAUUG	CAAUGUUAUCAUCAGCCAC	160	0.825953
NC_004161.1	VP40	GGAAGACAGGAAAGAAAGG	CCUUUCUUUCCUGUCUUCC	659	0.824818
NC_004161.1	VP40	GGUUGGGCAAUCAGGCAUU	AAUGCCUGAUUGCCCAACC	452	0.823903
NC_004161.1	VP40	AUACAGCUUUGAUUCAACA	UGUUGAAUCAAAGCUGUAU	315	0.823827
NC_004161.1	VP40	CAGGCAUUCCUUCAAGAGU	ACUCUUGAAGGAAUGCCUG	463	0.823005
NC_004161.1	VP40	UCAGAAGAUAUACAGCUUU	AAAGCUGUAUAUCUUCUGA	306	0.821927
NC_004161.1	VP40	GAAAGAAAGGACAUGCUUC	GAAGCAUGUCCUUUCUUUC	668	0.821882
NC_004161.1	VP40	AAGUGUCAUAGUCAAUGAG	CUCAUUGACUAUGACACUU	81	0.820596
NC_004161.1	VP40	AGCUCUAAAGCUCAUCACU	AGUGAUGAGCUUUAGAGCU	531	0.820329
NC_004161.1	VP40	GAGUGUUACCAACGGCUCC	GGAGCCGUUGGUAACACUC	11	0.818924
NC_004161.1	VP40	UGCCGGGGAAGACAGGAAA	UUUCCUGUCUUCCCCGGCA	653	0.817250
NC_004161.1	VP40	CCGGGGAAGACAGGAAAGA	UCUUUCCUGUCUUCCCCGG	655	0.816468
NC_004161.1	VP40	CGACUCCUAAGGUUGGGCA	UGCCCAACCUUAGGAGUCG	442	0.815979
NC_004161.1	VP40	UAACUAUGGUUAUCACCCA	UGGGUGAUAACCAUAGUUA	908	0.815863
NC_004161.1	VP40	GUUACCAACGGCUCCUCCA	UGGAGGAGCCGUUGGUAAC	15	0.814221
NC_004161.1	VP40	CACCUGACAAGAUUCAAAC	GUUUGAAUCUUGUCAGGUG	698	0.813668
NC_004161.1	VP40	GCUCCUCCAGCAUAUAAUG	CAUUAUAUGCUGGAGGAGC	25	0.813251
NC_004161.1	VP40	AGCUGAUCAGAAGAUAUAC	GUAUAUCUUCUGAUCAGCU	300	0.813068
NC_004161.1	VP40	UGGGUGUAGCUGAUCAGAA	UUCUGAUCAGCUACACCCA	293	0.812875
NC_004161.1	VP40	GGAUUGUGAUUCAUGCCAC	GUGGCAUGAAUCACAAUCC	927	0.811682
NC_004161.1	VP40	GACCUCAAAAUUGUCCCGA	UCGGGACAAUUUUGAGGUC	736	0.811596
NC_004161.1	VP40	ACUCCAAGCGGAGUAGCUU	AAGCUACUCCGCUUGGAGU	193	0.811462
NC_004161.1	VP40	GCUUCCACUGGGUGUAGCU	AGCUACACCCAGUGGAAGC	285	0.811252
NC_004161.1	VP40	CACCAGUCCAGCUUCCCCA	UGGGGAAGCUGGACUGGUG	491	0.810186
NC_004161.1	VP40	CAUCCGUAUCACAUGGACA	UGUCCAUGUGAUACGGAUG	958	0.809743
NC_004161.1	VP40	GAAUGUAAUUUCGGGAACA	UGUUCCCGAAAUUACAUUC	237	0.809468
NC_004161.1	VP40	UUAACAUCACCUGACAAGA	UCUUGUCAGGUGAUGUUAA	691	0.808291
NC_004161.1	VP40	AAAGGACAUGCUUCAGACU	AGUCUGAAGCAUGUCCUUU	673	0.806720
NC_004161.1	VP40	GUUCCAGAAUUACUAGUUC	GAACUAGUAAUUCUGGAAC	787	0.805143
NC_004161.1	VP40	AUGUAAUUUCGGGAACAAA	UUUGUUCCCGAAAUUACAU	239	0.805128
NC_004161.1	VP40	GCUGACCGGCAAAAAACCA	UGGUUUUUUGCCGGUCAGC	810	0.805125
NC_004161.1	VP40	UUGAUCUAACAGCUCUAAA	UUUAGAGCUGUUAGAUCAA	521	0.804977
NC_004161.1	VP40	GGCAGAUGUUCCAUCAAAC	GUUUGAUGGAACAUCUGCC	129	0.804435
NC_004161.1	VP40	GCCCAGGAAUACCCGAUCA	UGAUCGGGUAUUCCUGGGC	416	0.804345
NC_004161.1	VP40	UCCAGCUUCCCCAGUAUUU	AAAUACUGGGGAAGCUGGA	497	0.804196
NC_004161.1	VP40	UGCAUACCCUAUGAGCAUA	UAUGCUCAUAGGGUAUGCA	48	0.803967
NC_004161.1	VP40	GAUUCAUGCCACUCUCCAG	CUGGAGAGUGGCAUGAAUC	934	0.803692
NC_004161.1	VP40	AGUGUUACCAACGGCUCCU	AGGAGCCGUUGGUAACACU	12	0.803637
NC_004161.1	VP40	AAGAUUCAAACAAUCAUGA	UCAUGAUUGUUUGAAUCUU	706	0.802783
NC_004161.1	VP40	ACAGUGACACACUUCGGGA	UCCCGAAGUGUGUCACUGU	361	0.801269
NC_004161.1	VP40	GCCAGGGGCAGAUGUUCCA	UGGAACAUCUGCCCCUGGC	123	0.799926
NC_004161.1	VP40	GAGUUUGUUCUUCCACCAG	CUGGUGGAAGAACAAACUC	478	0.799411
NC_004161.1	VP40	AGUUUGUUCUUCCACCAGU	ACUGGUGGAAGAACAAACU	479	0.797988
NC_004161.1	VP40	AAUACCGGACCUCAAAAUU	AAUUUUGAGGUCCGGUAUU	729	0.797970
NC_004161.1	VP40	UAAUGAUAUUGCAUACCCU	AGGGUAUGCAAUAUCAUUA	39	0.797368
NC_004161.1	VP40	CAGUCCAGCUUCCCCAGUA	UACUGGGGAAGCUGGACUG	494	0.797363
NC_004161.1	VP40	CCCCAGUAUUUCACAUUUG	CAAAUGUGAAAUACUGGGG	505	0.795567
NC_004161.1	VP40	UUGCAUACCCUAUGAGCAU	AUGCUCAUAGGGUAUGCAA	47	0.795121
NC_004161.1	VP40	UCUUCUUCCGAAAUAUGUU	AACAUAUUUCGGAAGAAGA	861	0.794640
NC_004161.1	VP40	AACCAAGAACAUAGUUGGA	UCCAACUAUGUUCUUGGUU	762	0.794466
NC_004161.1	VP40	ACACAGUGACACACUUCGG	CCGAAGUGUGUCACUGUGU	359	0.794297
NC_004161.1	VP40	UAACAUCACCUGACAAGAU	AUCUUGUCAGGUGAUGUUA	692	0.793114
NC_004161.1	VP40	CCGACCAAGUGUCAUAGUC	GACUAUGACACUUGGUCGG	75	0.791941
NC_004161.1	VP40	CAGGCUAGGCCCAGGAAUA	UAUUCCUGGGCCUAGCCUG	408	0.791937
NC_004161.1	VP40	AACCAAUUAUUCCAGUUCU	AGAACUGGAAUAAUUGGUU	845	0.790801
NC_004161.1	VP40	GUUCAAAGGCUGACCGGCA	UGCCGGUCAGCCUUUGAAC	802	0.789580
NC_004161.1	VP40	CCAUACUCCAAGCGGAGUA	UACUCCGCUUGGAGUAUGG	189	0.788274
NC_004161.1	VP40	AGGUUGGGCAAUCAGGCAU	AUGCCUGAUUGCCCAACCU	451	0.786938
NC_004161.1	VP40	AUUACUAGUUCAAAGGCUG	CAGCCUUUGAACUAGUAAU	795	0.785215
NC_004161.1	VP40	CUACGACUCCUAAGGUUGG	CCAACCUUAGGAGUCGUAG	439	0.783476
NC_004161.1	VP40	AUAUCGCCAGGGGACUUAA	UUAAGUCCCCUGGCGAUAU	892	0.783198
NC_004161.1	VP40	UGACAAGAUUCAAACAAUC	GAUUGUUUGAAUCUUGUCA	702	0.783185
NC_004161.1	VP40	GCUUCCCCAGUAUUUCACA	UGUGAAAUACUGGGGAAGC	501	0.780751
NC_004161.1	VP40	UCCUCCAGCAUAUAAUGAU	AUCAUUAUAUGCUGGAGGA	27	0.780466
NC_004161.1	VP40	CCGAAAUAUGUUGGACUUG	CAAGUCCAACAUAUUUCGG	868	0.780331
NC_004161.1	VP40	CAAAAAUGGCCAACCAAUU	AAUUGGUUGGCCAUUUUUG	834	0.778355
NC_004161.1	VP40	UCCACUGGGUGUAGCUGAU	AUCAGCUACACCCAGUGGA	288	0.776774
NC_004161.1	VP40	GAGGCGCGGAGUGUUACCA	UGGUAACACUCCGCGCCUC	3	0.776465
NC_004161.1	VP40	UGUCAACAGGCUAGGCCCA	UGGGCCUAGCCUGUUGACA	402	0.776134
NC_004161.1	VP40	GUGAAUGUAAUUUCGGGAA	UUCCCGAAAUUACAUUCAC	235	0.775853
NC_004161.1	VP40	AUCCGUAUCACAUGGACAA	UUGUCCAUGUGAUACGGAU	959	0.775611
NC_004161.1	VP40	CAGUGCCAGGGGCAGAUGU	ACAUCUGCCCCUGGCACUG	119	0.773513
NC_004161.1	VP40	AACAAUCAUGAAUGCAAUA	UAUUGCAUUCAUGAUUGUU	714	0.773427
NC_004161.1	VP40	CCCGACCAAGUGUCAUAGU	ACUAUGACACUUGGUCGGG	74	0.773115
NC_004161.1	VP40	ACCGGACCUCAAAAUUGUC	GACAAUUUUGAGGUCCGGU	732	0.772891
NC_004161.1	VP40	AGAAUUACUAGUUCAAAGG	CCUUUGAACUAGUAAUUCU	792	0.772243
NC_004161.1	VP40	UAUUUCACAUUUGAUCUAA	UUAGAUCAAAUGUGAAAUA	511	0.771448
NC_004161.1	VP40	GUGUCAACAGGCUAGGCCC	GGGCCUAGCCUGUUGACAC	401	0.771417
NC_004161.1	VP40	CCCAGGAUUGUGAUUCAUG	CAUGAAUCACAAUCCUGGG	923	0.771170
NC_004161.1	VP40	AAGGUUGGGCAAUCAGGCA	UGCCUGAUUGCCCAACCUU	450	0.770461
NC_004161.1	VP40	CUUAACAUCACCUGACAAG	CUUGUCAGGUGAUGUUAAG	690	0.770081
NC_004161.1	VP40	CAUGAGACCAGUGGCUGAU	AUCAGCCACUGGUCUCAUG	150	0.769512
NC_004161.1	VP40	UAGCUUCUGCCUUUAUAUU	AAUAUAAAGGCAGAAGCUA	206	0.769510
NC_004161.1	VP40	CCCGCUGGUACGUGUCAAC	GUUGACACGUACCAGCGGG	390	0.769415
NC_004161.1	VP40	GUGUUACCAACGGCUCCUC	GAGGAGCCGUUGGUAACAC	13	0.769177
NC_004161.1	VP40	CAUGAAUGCAAUACCGGAC	GUCCGGUAUUGCAUUCAUG	720	0.767557
NC_004161.1	VP40	CAAAGGCUGACCGGCAAAA	UUUUGCCGGUCAGCCUUUG	805	0.767520
NC_004161.1	VP40	CUAAAGCUCAUCACUCAAC	GUUGAGUGAUGAGCUUUAG	535	0.767481
NC_004161.1	VP40	CUUCAGACUUAACAUCACC	GGUGAUGUUAAGUCUGAAG	683	0.766944
NC_004161.1	VP40	UCAAAGGCUGACCGGCAAA	UUUGCCGGUCAGCCUUUGA	804	0.765869
NC_004161.1	VP40	CUGGGUGUAGCUGAUCAGA	UCUGAUCAGCUACACCCAG	292	0.764460
NC_004161.1	VP40	CCAACCAAUUAUUCCAGUU	AACUGGAAUAAUUGGUUGG	843	0.764343
NC_004161.1	VP40	AAUGUAAUUUCGGGAACAA	UUGUUCCCGAAAUUACAUU	238	0.763936
NC_004161.1	VP40	CUUCUGCCUUUAUAUUGGA	UCCAAUAUAAAGGCAGAAG	209	0.763692
NC_004161.1	VP40	AUCAGGCAUUCCUUCAAGA	UCUUGAAGGAAUGCCUGAU	461	0.763529
NC_004161.1	VP40	GUCCUGGGCUCUCACUCCA	UGGAGUGAGAGCCCAGGAC	611	0.762879
NC_004161.1	VP40	GGGCUCUCACUCCAUCCCA	UGGGAUGGAGUGAGAGCCC	616	0.762495
NC_004161.1	VP40	AAGAUAUACAGCUUUGAUU	AAUCAAAGCUGUAUAUCUU	310	0.762425
NC_004161.1	VP40	UCCCCAGUAUUUCACAUUU	AAAUGUGAAAUACUGGGGA	504	0.762096
NC_004161.1	VP40	UGAUCUAACAGCUCUAAAG	CUUUAGAGCUGUUAGAUCA	522	0.761981
NC_004161.1	VP40	GCAUUCCUUCAAGAGUUUG	CAAACUCUUGAAGGAAUGC	466	0.760194
NC_004161.1	VP40	AAUUAUGUUGGCUUCCUAC	GUAGGAAGCCAACAUAAUU	342	0.760102
NC_004161.1	VP40	AGUGAAUGUAAUUUCGGGA	UCCCGAAAUUACAUUCACU	234	0.760019
NC_004161.1	VP40	UCCAGCAUAUAAUGAUAUU	AAUAUCAUUAUAUGCUGGA	30	0.760003
NC_004161.1	VP40	ACCAGUGGCUGAUGAUAAC	GUUAUCAUCAGCCACUGGU	156	0.759152
NC_004161.1	VP40	CCCAGGAAUACCCGAUCAU	AUGAUCGGGUAUUCCUGGG	417	0.758532
NC_004161.1	VP40	UAUGGUUAUCACCCAGGAU	AUCCUGGGUGAUAACCAUA	912	0.757813
NC_004161.1	VP40	AUUGCAUACCCUAUGAGCA	UGCUCAUAGGGUAUGCAAU	46	0.757493
NC_004161.1	VP40	UCGGGAACAAAAGUCCUGA	UCAGGACUUUUGUUCCCGA	247	0.756014
NC_004161.1	VP40	CUAUGAGCAUACUCCCAAC	GUUGGGAGUAUGCUCAUAG	56	0.754873
NC_004161.1	VP40	UUCAAAGGCUGACCGGCAA	UUGCCGGUCAGCCUUUGAA	803	0.754101
NC_004161.1	VP40	AAGACAGGAAAGAAAGGAC	GUCCUUUCUUUCCUGUCUU	661	0.754012
NC_004161.1	VP40	ACUGGGUGUAGCUGAUCAG	CUGAUCAGCUACACCCAGU	291	0.753978
NC_004161.1	VP40	ACCAAGAACAUAGUUGGAA	UUCCAACUAUGUUCUUGGU	763	0.753813
NC_004161.1	VP40	GCGGAGUGUUACCAACGGC	GCCGUUGGUAACACUCCGC	8	0.753626
NC_004161.1	VP40	CUGAUCAGAAGAUAUACAG	CUGUAUAUCUUCUGAUCAG	302	0.753301
NC_004161.1	VP40	CUUCCCCAGUAUUUCACAU	AUGUGAAAUACUGGGGAAG	502	0.753136
NC_004161.1	VP40	UUAUCACCCAGGAUUGUGA	UCACAAUCCUGGGUGAUAA	917	0.753027
NC_004161.1	VP40	AGUAUUUCACAUUUGAUCU	AGAUCAAAUGUGAAAUACU	509	0.752798
NC_004161.1	VP40	CGGACCUCAAAAUUGUCCC	GGGACAAUUUUGAGGUCCG	734	0.752168
NC_004161.1	VP40	UGGCCAACCAAUUAUUCCA	UGGAAUAAUUGGUUGGCCA	840	0.751816
NC_004161.1	VP40	CUCCAAGCGGAGUAGCUUC	GAAGCUACUCCGCUUGGAG	194	0.751439
NC_004161.1	VP40	AGAUAUACAGCUUUGAUUC	GAAUCAAAGCUGUAUAUCU	311	0.751202
NC_004161.1	VP40	GCGCGGAGUGUUACCAACG	CGUUGGUAACACUCCGCGC	6	0.751095
NC_004161.1	VP40	ACAUCACCUGACAAGAUUC	GAAUCUUGUCAGGUGAUGU	694	0.750831
NC_004161.1	VP40	AAGAAAGGACAUGCUUCAG	CUGAAGCAUGUCCUUUCUU	670	0.750547
NC_004161.1	VP40	UGAUAUUGCAUACCCUAUG	CAUAGGGUAUGCAAUAUCA	42	0.749928
NC_004161.1	VP40	CUCAAAAUUGUCCCGAUUG	CAAUCGGGACAAUUUUGAG	739	0.749411
NC_004161.1	VP40	ACAACAGCCGCAAUUAUGU	ACAUAAUUGCGGCUGUUGU	331	0.749349
NC_004161.1	VP40	UUCUGCCUUUAUAUUGGAA	UUCCAAUAUAAAGGCAGAA	210	0.748867
NC_004161.1	VP40	UUGAGGUUCCAGAAUUACU	AGUAAUUCUGGAACCUCAA	782	0.748787
NC_004161.1	VP40	AGUCAAUGCUCUUCGUCCU	AGGACGAAGAGCAUUGACU	597	0.747924
NC_004161.1	VP40	UGAAUGCAAUACCGGACCU	AGGUCCGGUAUUGCAUUCA	722	0.747084
NC_004161.1	VP40	ACCCGACCAAGUGUCAUAG	CUAUGACACUUGGUCGGGU	73	0.746610
NC_004161.1	VP40	GGGAACAAAAGUCCUGAUG	CAUCAGGACUUUUGUUCCC	249	0.746003
NC_004161.1	VP40	CUAUAUCGCCAGGGGACUU	AAGUCCCCUGGCGAUAUAG	890	0.744696
NC_004161.1	VP40	AGUGACACACUUCGGGAAG	CUUCCCGAAGUGUGUCACU	363	0.743392
NC_004161.1	VP40	AGACUUAACAUCACCUGAC	GUCAGGUGAUGUUAAGUCU	687	0.742536
NC_004161.1	VP40	CCAAGUGUCAUAGUCAAUG	CAUUGACUAUGACACUUGG	79	0.742234
NC_004161.1	VP40	UGAGACCAGUGGCUGAUGA	UCAUCAGCCACUGGUCUCA	152	0.741018
NC_004161.1	VP40	CCAACGGCUCCUCCAGCAU	AUGCUGGAGGAGCCGUUGG	19	0.740247
NC_004161.1	VP40	CCAGCAUAUAAUGAUAUUG	CAAUAUCAUUAUAUGCUGG	31	0.739663
NC_004161.1	VP40	CCAGGAUUGUGAUUCAUGC	GCAUGAAUCACAAUCCUGG	924	0.739307
NC_004161.1	VP40	UGAUUCAUGCCACUCUCCA	UGGAGAGUGGCAUGAAUCA	933	0.738373
NC_004161.1	VP40	CAUACCCUAUGAGCAUACU	AGUAUGCUCAUAGGGUAUG	50	0.737224
NC_004161.1	VP40	CAAUCAUGAAUGCAAUACC	GGUAUUGCAUUCAUGAUUG	716	0.736462
NC_004161.1	VP40	UGGUUAUCACCCAGGAUUG	CAAUCCUGGGUGAUAACCA	914	0.736198
NC_004161.1	VP40	UCCAAGCGGAGUAGCUUCU	AGAAGCUACUCCGCUUGGA	195	0.736154
NC_004161.1	VP40	CCCAAAAAUGGCCAACCAA	UUGGUUGGCCAUUUUUGGG	832	0.735848
NC_004161.1	VP40	GCUCUAAAGCUCAUCACUC	GAGUGAUGAGCUUUAGAGC	532	0.734465
NC_004161.1	VP40	GUUUGUUCUUCCACCAGUC	GACUGGUGGAAGAACAAAC	480	0.734144
NC_004161.1	VP40	AGCCGCAAUUAUGUUGGCU	AGCCAACAUAAUUGCGGCU	336	0.733042
NC_004161.1	VP40	UAUAUUGGAAGCUACAGUG	CACUGUAGCUUCCAAUAUA	219	0.732633
NC_004161.1	VP40	CGCAAUUAUGUUGGCUUCC	GGAAGCCAACAUAAUUGCG	339	0.731438
NC_004161.1	VP40	CGAAACUCCAGCAGGAGCA	UGCUCCUGCUGGAGUUUCG	579	0.731276
NC_004161.1	VP40	UCUUCCGAAAUAUGUUGGA	UCCAACAUAUUUCGGAAGA	864	0.730524
NC_004161.1	VP40	CAGCUCUAAAGCUCAUCAC	GUGAUGAGCUUUAGAGCUG	530	0.730065
NC_004161.1	VP40	UUCAGACUUAACAUCACCU	AGGUGAUGUUAAGUCUGAA	684	0.729799
NC_004161.1	VP40	GGACCUCAAAAUUGUCCCG	CGGGACAAUUUUGAGGUCC	735	0.728820
NC_004161.1	VP40	UAUCACCCAGGAUUGUGAU	AUCACAAUCCUGGGUGAUA	918	0.728777
NC_004161.1	VP40	CAAGAGUUUGUUCUUCCAC	GUGGAAGAACAAACUCUUG	475	0.727343
NC_004161.1	VP40	AGGCUGACCGGCAAAAAAC	GUUUUUUGCCGGUCAGCCU	808	0.727010
NC_004161.1	VP40	ACCAGUCCAGCUUCCCCAG	CUGGGGAAGCUGGACUGGU	492	0.726768
NC_004161.1	VP40	GCUCUCACUCCAUCCCAAG	CUUGGGAUGGAGUGAGAGC	618	0.726714
NC_004161.1	VP40	UGUGAUUCAUGCCACUCUC	GAGAGUGGCAUGAAUCACA	931	0.725844
NC_004161.1	VP40	AUACCGGACCUCAAAAUUG	CAAUUUUGAGGUCCGGUAU	730	0.724758
NC_004161.1	VP40	GGCAAAAAACCACAACCCA	UGGGUUGUGGUUUUUUGCC	817	0.724427
NC_004161.1	VP40	AACGGCUCCUCCAGCAUAU	AUAUGCUGGAGGAGCCGUU	21	0.724011
NC_004161.1	VP40	AUAACAUUGAUCACUCAAG	CUUGAGUGAUCAAUGUUAU	170	0.723327
NC_004161.1	VP40	AUUCCUUCAAGAGUUUGUU	AACAAACUCUUGAAGGAAU	468	0.722585
NC_004161.1	VP40	AUGGUUAUCACCCAGGAUU	AAUCCUGGGUGAUAACCAU	913	0.722084
NC_004161.1	VP40	UUGUUCUUCCACCAGUCCA	UGGACUGGUGGAAGAACAA	482	0.721781
NC_004161.1	VP40	ACUCCUAAGGUUGGGCAAU	AUUGCCCAACCUUAGGAGU	444	0.720739
NC_004161.1	VP40	GUUCUUCUUCCGAAAUAUG	CAUAUUUCGGAAGAAGAAC	859	0.720187
NC_004161.1	VP40	GCCAGCUGCAACCUGGACA	UGUCCAGGUUGCAGCUGGC	558	0.719334
NC_004161.1	VP40	AACCCGCUGGUACGUGUCA	UGACACGUACCAGCGGGUU	388	0.718709
NC_004161.1	VP40	AUUCAACAACAGCCGCAAU	AUUGCGGCUGUUGUUGAAU	326	0.718313
NC_004161.1	VP40	AAAGGCUGACCGGCAAAAA	UUUUUGCCGGUCAGCCUUU	806	0.717855
NC_004161.1	VP40	GGCAAUCAGGCAUUCCUUC	GAAGGAAUGCCUGAUUGCC	457	0.717563
NC_004161.1	VP40	CCACCAGUCCAGCUUCCCC	GGGGAAGCUGGACUGGUGG	490	0.716449
NC_004161.1	VP40	CCAAGCGGAGUAGCUUCUG	CAGAAGCUACUCCGCUUGG	196	0.715819
NC_004161.1	VP40	CCGGACCUCAAAAUUGUCC	GGACAAUUUUGAGGUCCGG	733	0.714958
NC_004161.1	VP40	CCAGCUUCCCCAGUAUUUC	GAAAUACUGGGGAAGCUGG	498	0.714417
NC_004161.1	VP40	ACUCCAUCCCAAGCUUCGU	ACGAAGCUUGGGAUGGAGU	624	0.713938
NC_004161.1	VP40	CAUACUCCAAGCGGAGUAG	CUACUCCGCUUGGAGUAUG	190	0.713874
NC_004161.1	VP40	CUUCCGAAAUAUGUUGGAC	GUCCAACAUAUUUCGGAAG	865	0.713809
NC_004161.1	VP40	GAAUUACUAGUUCAAAGGC	GCCUUUGAACUAGUAAUUC	793	0.713086
NC_004161.1	VP40	UGUUCUUCCACCAGUCCAG	CUGGACUGGUGGAAGAACA	483	0.712777
NC_004161.1	VP40	GUUAUCACCCAGGAUUGUG	CACAAUCCUGGGUGAUAAC	916	0.711464
NC_004161.1	VP40	CAGCAUAUAAUGAUAUUGC	GCAAUAUCAUUAUAUGCUG	32	0.711303
NC_004161.1	VP40	CAGGAUUGUGAUUCAUGCC	GGCAUGAAUCACAAUCCUG	925	0.711094
NC_004161.1	VP40	AGCUUCUGCCUUUAUAUUG	CAAUAUAAAGGCAGAAGCU	207	0.710580
NC_004161.1	VP40	GCUUCUGCCUUUAUAUUGG	CCAAUAUAAAGGCAGAAGC	208	0.710374
NC_004161.1	VP40	ACAGGAAAGAAAGGACAUG	CAUGUCCUUUCUUUCCUGU	664	0.709969
NC_004161.1	VP40	UCAAACAAUCAUGAAUGCA	UGCAUUCAUGAUUGUUUGA	711	0.709854
NC_004161.1	VP40	GCCAUACUCCAAGCGGAGU	ACUCCGCUUGGAGUAUGGC	188	0.709588
NC_004161.1	VP40	AUCACCCAGGAUUGUGAUU	AAUCACAAUCCUGGGUGAU	919	0.709365
NC_004161.1	VP40	GCAUACCCUAUGAGCAUAC	GUAUGCUCAUAGGGUAUGC	49	0.707603
NC_004161.1	VP40	CCAGGGGCAGAUGUUCCAU	AUGGAACAUCUGCCCCUGG	124	0.706627
NC_004161.1	VP40	ACAUAGUUGGAAUUGAGGU	ACCUCAAUUCCAACUAUGU	770	0.705397
NC_004161.1	VP40	UUAUAUUGGAAGCUACAGU	ACUGUAGCUUCCAAUAUAA	218	0.704132
NC_004161.1	VP40	UCAACAACAGCCGCAAUUA	UAAUUGCGGCUGUUGUUGA	328	0.703096
NC_004161.1	VP40	UGUCAUAGUCAAUGAGACC	GGUCUCAUUGACUAUGACA	84	0.703053
NC_004161.1	VP40	AAAUGGCCAACCAAUUAUU	AAUAAUUGGUUGGCCAUUU	837	0.702368
NC_004161.1	VP40	AUAUAAUGAUAUUGCAUAC	GUAUGCAAUAUCAUUAUAU	36	0.695932
NC_004161.1	VP40	UCCUUCAAGAGUUUGUUCU	AGAACAAACUCUUGAAGGA	470	0.694998
NC_004161.1	VP40	AAAAUGGCCAACCAAUUAU	AUAAUUGGUUGGCCAUUUU	836	0.693556
NC_004161.1	VP40	UCCCAACCCGACCAAGUGU	ACACUUGGUCGGGUUGGGA	68	0.692576
NC_004161.1	VP40	UCAGACUUAACAUCACCUG	CAGGUGAUGUUAAGUCUGA	685	0.691792
NC_004161.1	VP40	CUUCUUCCGAAAUAUGUUG	CAACAUAUUUCGGAAGAAG	862	0.691180
NC_004161.1	VP40	UCUUCGUCCUGGGCUCUCA	UGAGAGCCCAGGACGAAGA	606	0.690581
NC_004161.1	VP40	CCUGCCGGGGAAGACAGGA	UCCUGUCUUCCCCGGCAGG	651	0.690564
NC_004161.1	VP40	CAACCAAUUAUUCCAGUUC	GAACUGGAAUAAUUGGUUG	844	0.689639
NC_004161.1	VP40	CAGUAUUUCACAUUUGAUC	GAUCAAAUGUGAAAUACUG	508	0.687148
NC_004161.1	VP40	UGAUGAUAACAUUGAUCAC	GUGAUCAAUGUUAUCAUCA	165	0.686425
NC_004161.1	VP40	CUAAGGUUGGGCAAUCAGG	CCUGAUUGCCCAACCUUAG	448	0.685648
NC_004161.1	VP40	AUCUAACAGCUCUAAAGCU	AGCUUUAGAGCUGUUAGAU	524	0.683600
NC_004161.1	VP40	AAAAAACCACAACCCAAAA	UUUUGGGUUGUGGUUUUUU	820	0.683491
NC_004161.1	VP40	GGCAGUGCCAGGGGCAGAU	AUCUGCCCCUGGCACUGCC	117	0.683343
NC_004161.1	VP40	GCAGUGCCAGGGGCAGAUG	CAUCUGCCCCUGGCACUGC	118	0.681692
NC_004161.1	VP40	UACUCCAAGCGGAGUAGCU	AGCUACUCCGCUUGGAGUA	192	0.681549
NC_004161.1	VP40	UGAUUCAACAACAGCCGCA	UGCGGCUGUUGUUGAAUCA	324	0.680951
NC_004161.1	VP40	UCCUGGGCUCUCACUCCAU	AUGGAGUGAGAGCCCAGGA	612	0.680411
NC_004161.1	VP40	CCAGGAAUACCCGAUCAUC	GAUGAUCGGGUAUUCCUGG	418	0.679503
NC_004161.1	VP40	UGUUACCAACGGCUCCUCC	GGAGGAGCCGUUGGUAACA	14	0.677272
NC_004161.1	VP40	UACUAGUUCAAAGGCUGAC	GUCAGCCUUUGAACUAGUA	797	0.676665
NC_004161.1	VP40	UUGCCAGCUGCAACCUGGA	UCCAGGUUGCAGCUGGCAA	556	0.675822
NC_004161.1	VP40	AGCUUCCCCAGUAUUUCAC	GUGAAAUACUGGGGAAGCU	500	0.675472
NC_004161.1	VP40	GAAUGCAAUACCGGACCUC	GAGGUCCGGUAUUGCAUUC	723	0.674150
NC_004161.1	VP40	CAUUGCCAGCUGCAACCUG	CAGGUUGCAGCUGGCAAUG	554	0.673447
NC_004161.1	VP40	ACAUUUGAUCUAACAGCUC	GAGCUGUUAGAUCAAAUGU	517	0.673173
NC_004161.1	VP40	GCCAACCAAUUAUUCCAGU	ACUGGAAUAAUUGGUUGGC	842	0.672285
NC_004161.1	VP40	CGUCCUGGGCUCUCACUCC	GGAGUGAGAGCCCAGGACG	610	0.670984
NC_004161.1	VP40	GGCCAACCAAUUAUUCCAG	CUGGAAUAAUUGGUUGGCC	841	0.669660
NC_004161.1	VP40	GUGCCAGGGGCAGAUGUUC	GAACAUCUGCCCCUGGCAC	121	0.669489
NC_004161.1	VP40	UUCCACUGGGUGUAGCUGA	UCAGCUACACCCAGUGGAA	287	0.668134
NC_004161.1	VP40	ACUCAACCAUUGCCAGCUG	CAGCUGGCAAUGGUUGAGU	547	0.667104
NC_004161.1	VP40	GUUGGAAUUGAGGUUCCAG	CUGGAACCUCAAUUCCAAC	775	0.667004
NC_004161.1	VP40	UGGGCAAUCAGGCAUUCCU	AGGAAUGCCUGAUUGCCCA	455	0.665064
NC_004161.1	VP40	UUGUGAUUCAUGCCACUCU	AGAGUGGCAUGAAUCACAA	930	0.665002
NC_004161.1	VP40	CAGUCAAUGCUCUUCGUCC	GGACGAAGAGCAUUGACUG	596	0.664587
NC_004161.1	VP40	GUUGGGCAAUCAGGCAUUC	GAAUGCCUGAUUGCCCAAC	453	0.663735
NC_004161.1	VP40	CAACAGGCUAGGCCCAGGA	UCCUGGGCCUAGCCUGUUG	405	0.663333
NC_004161.1	VP40	CAGUGAAUGUAAUUUCGGG	CCCGAAAUUACAUUCACUG	233	0.660344
NC_004161.1	VP40	CUUCCACUGGGUGUAGCUG	CAGCUACACCCAGUGGAAG	286	0.659389
NC_004161.1	VP40	GGCUGACCGGCAAAAAACC	GGUUUUUUGCCGGUCAGCC	809	0.657100
NC_004161.1	VP40	AAAAAUGGCCAACCAAUUA	UAAUUGGUUGGCCAUUUUU	835	0.655548
NC_004161.1	VP40	AUUGAGGUUCCAGAAUUAC	GUAAUUCUGGAACCUCAAU	781	0.654591
NC_004161.1	VP40	UUCCGAAAUAUGUUGGACU	AGUCCAACAUAUUUCGGAA	866	0.653805
NC_004161.1	VP40	CAGCCGCAAUUAUGUUGGC	GCCAACAUAAUUGCGGCUG	335	0.652564
NC_004161.1	VP40	UAUACAGCUUUGAUUCAAC	GUUGAAUCAAAGCUGUAUA	314	0.652075
NC_004161.1	VP40	UCUUCCACCAGUCCAGCUU	AAGCUGGACUGGUGGAAGA	486	0.651916
NC_004161.1	VP40	AAGAGUUUGUUCUUCCACC	GGUGGAAGAACAAACUCUU	476	0.651840
NC_004161.1	VP40	UCUCCUGCCGGGGAAGACA	UGUCUUCCCCGGCAGGAGA	648	0.651509
NC_004161.1	VP40	UUGGAAUUGAGGUUCCAGA	UCUGGAACCUCAAUUCCAA	776	0.650931
NC_004161.1	VP40	UAUAUCGCCAGGGGACUUA	UAAGUCCCCUGGCGAUAUA	891	0.649902
NC_004161.1	VP40	CCAUCCGUAUCACAUGGAC	GUCCAUGUGAUACGGAUGG	957	0.649881
NC_004161.1	VP40	AAUCAUGAAUGCAAUACCG	CGGUAUUGCAUUCAUGAUU	717	0.649735
NC_004161.1	VP40	AUCCUAUAUCGCCAGGGGA	UCCCCUGGCGAUAUAGGAU	887	0.648347
NC_004161.1	VP40	UUUCACAUUUGAUCUAACA	UGUUAGAUCAAAUGUGAAA	513	0.648344
NC_004161.1	VP40	CAGGAAAGAAAGGACAUGC	GCAUGUCCUUUCUUUCCUG	665	0.648299
NC_004161.1	VP40	UCUAACAGCUCUAAAGCUC	GAGCUUUAGAGCUGUUAGA	525	0.647803
NC_004161.1	VP40	CUCCCAACCCGACCAAGUG	CACUUGGUCGGGUUGGGAG	67	0.646899
NC_004161.1	VP40	CACUCCAUCCCAAGCUUCG	CGAAGCUUGGGAUGGAGUG	623	0.644965
NC_004161.1	VP40	CUUCGUCCUGGGCUCUCAC	GUGAGAGCCCAGGACGAAG	607	0.644933
NC_004161.1	VP40	UAGUUGGAAUUGAGGUUCC	GGAACCUCAAUUCCAACUA	773	0.644496
NC_004161.1	VP40	ACUAGUUCAAAGGCUGACC	GGUCAGCCUUUGAACUAGU	798	0.643545
NC_004161.1	VP40	AUAUUGCAUACCCUAUGAG	CUCAUAGGGUAUGCAAUAU	44	0.642689
NC_004161.1	VP40	CCAGUCCAGCUUCCCCAGU	ACUGGGGAAGCUGGACUGG	493	0.642561
NC_004161.1	VP40	AAUCAGGCAUUCCUUCAAG	CUUGAAGGAAUGCCUGAUU	460	0.642438
NC_004161.1	VP40	GCCAUCCGUAUCACAUGGA	UCCAUGUGAUACGGAUGGC	956	0.641642
NC_004161.1	VP40	ACUCCCAACCCGACCAAGU	ACUUGGUCGGGUUGGGAGU	66	0.641410
NC_004161.1	VP40	CUCCUAAGGUUGGGCAAUC	GAUUGCCCAACCUUAGGAG	445	0.641289
NC_004161.1	VP40	AAAACCACAACCCAAAAAU	AUUUUUGGGUUGUGGUUUU	822	0.640379
NC_004161.1	VP40	AACAGCCGCAAUUAUGUUG	CAACAUAAUUGCGGCUGUU	333	0.640281
NC_004161.1	VP40	CCUGGGCUCUCACUCCAUC	GAUGGAGUGAGAGCCCAGG	613	0.640057
NC_004161.1	VP40	CUGACCGGCAAAAAACCAC	GUGGUUUUUUGCCGGUCAG	811	0.639988
NC_004161.1	VP40	UCAACCAUUGCCAGCUGCA	UGCAGCUGGCAAUGGUUGA	549	0.638671
NC_004161.1	VP40	GAUCUAACAGCUCUAAAGC	GCUUUAGAGCUGUUAGAUC	523	0.638669
NC_004161.1	VP40	ACUAUGGUUAUCACCCAGG	CCUGGGUGAUAACCAUAGU	910	0.638411
NC_004161.1	VP40	CUUCCACCAGUCCAGCUUC	GAAGCUGGACUGGUGGAAG	487	0.638374
NC_004161.1	VP40	ACAGGCUAGGCCCAGGAAU	AUUCCUGGGCCUAGCCUGU	407	0.637018
NC_004161.1	VP40	AACAGGCUAGGCCCAGGAA	UUCCUGGGCCUAGCCUGUU	406	0.636745
NC_004161.1	VP40	AAAAACCACAACCCAAAAA	UUUUUGGGUUGUGGUUUUU	821	0.636190
NC_004161.1	VP40	UGAUCAGAAGAUAUACAGC	GCUGUAUAUCUUCUGAUCA	303	0.635797
NC_004161.1	VP40	AGGAAUACCCGAUCAUCCG	CGGAUGAUCGGGUAUUCCU	420	0.635593
NC_004161.1	VP40	GUCAAUGCUCUUCGUCCUG	CAGGACGAAGAGCAUUGAC	598	0.634144
NC_004161.1	VP40	CAGGAAUACCCGAUCAUCC	GGAUGAUCGGGUAUUCCUG	419	0.633760
NC_004161.1	VP40	ACCCUAUGAGCAUACUCCC	GGGAGUAUGCUCAUAGGGU	53	0.633209
NC_004161.1	VP40	AGCAUACUCCCAACCCGAC	GUCGGGUUGGGAGUAUGCU	61	0.630290
NC_004161.1	VP40	AGGCUAGGCCCAGGAAUAC	GUAUUCCUGGGCCUAGCCU	409	0.629237
NC_004161.1	VP40	CUCAUCACUCAACCAUUGC	GCAAUGGUUGAGUGAUGAG	541	0.628743
NC_004161.1	VP40	AGCCAUCCGUAUCACAUGG	CCAUGUGAUACGGAUGGCU	955	0.628471
NC_004161.1	VP40	CCACUGGGUGUAGCUGAUC	GAUCAGCUACACCCAGUGG	289	0.627013
NC_004161.1	VP40	CUCCUGCCGGGGAAGACAG	CUGUCUUCCCCGGCAGGAG	649	0.625641
NC_004161.1	VP40	CGUGUCAACAGGCUAGGCC	GGCCUAGCCUGUUGACACG	400	0.624933
NC_004161.1	VP40	CAUGCCACUCUCCAGCCAG	CUGGCUGGAGAGUGGCAUG	938	0.624553
NC_004161.1	VP40	ACGUGUCAACAGGCUAGGC	GCCUAGCCUGUUGACACGU	399	0.621739
NC_004161.1	VP40	CUCUCACUCCAUCCCAAGC	GCUUGGGAUGGAGUGAGAG	619	0.621619
NC_004161.1	VP40	ACAAUCAUGAAUGCAAUAC	GUAUUGCAUUCAUGAUUGU	715	0.621153
NC_004161.1	VP40	UAGUUCAAAGGCUGACCGG	CCGGUCAGCCUUUGAACUA	800	0.620926
NC_004161.1	VP40	AAAAUUGUCCCGAUUGAUC	GAUCAAUCGGGACAAUUUU	742	0.620758
NC_004161.1	VP40	AGGCCCAGGAAUACCCGAU	AUCGGGUAUUCCUGGGCCU	414	0.620175
NC_004161.1	VP40	UUCCCCAGUAUUUCACAUU	AAUGUGAAAUACUGGGGAA	503	0.619749
NC_004161.1	VP40	CUCCAUGAGACCAGUGGCU	AGCCACUGGUCUCAUGGAG	147	0.619597
NC_004161.1	VP40	GUCAACAGGCUAGGCCCAG	CUGGGCCUAGCCUGUUGAC	403	0.619416
NC_004161.1	VP40	UCAUGCCACUCUCCAGCCA	UGGCUGGAGAGUGGCAUGA	937	0.619162
NC_004161.1	VP40	UGGCAGUGCCAGGGGCAGA	UCUGCCCCUGGCACUGCCA	116	0.617516
NC_004161.1	VP40	UUCUUCUUCCGAAAUAUGU	ACAUAUUUCGGAAGAAGAA	860	0.617472
NC_004161.1	VP40	AUCAUGAAUGCAAUACCGG	CCGGUAUUGCAUUCAUGAU	718	0.617405
NC_004161.1	VP40	CUAGUUCAAAGGCUGACCG	CGGUCAGCCUUUGAACUAG	799	0.616950
NC_004161.1	VP40	UGCCUUUAUAUUGGAAGCU	AGCUUCCAAUAUAAAGGCA	213	0.616874
NC_004161.1	VP40	UCCGUAUCACAUGGACAAG	CUUGUCCAUGUGAUACGGA	960	0.616727
NC_004161.1	VP40	CUGCCUUUAUAUUGGAAGC	GCUUCCAAUAUAAAGGCAG	212	0.616637
NC_004161.1	VP40	CCCAACCCGACCAAGUGUC	GACACUUGGUCGGGUUGGG	69	0.613908
NC_004161.1	VP40	UACGUGUCAACAGGCUAGG	CCUAGCCUGUUGACACGUA	398	0.613669
NC_004161.1	VP40	ACAACCCAAAAAUGGCCAA	UUGGCCAUUUUUGGGUUGU	828	0.613393
NC_004161.1	VP40	GGCUAGGCCCAGGAAUACC	GGUAUUCCUGGGCCUAGCC	410	0.613061
NC_004161.1	VP40	UAACCCGCUGGUACGUGUC	GACACGUACCAGCGGGUUA	387	0.612673
NC_004161.1	VP40	GAAACUCCAGCAGGAGCAG	CUGCUCCUGCUGGAGUUUC	580	0.611980
NC_004161.1	VP40	CUUCAAGAGUUUGUUCUUC	GAAGAACAAACUCUUGAAG	472	0.611416
NC_004161.1	VP40	GAUCCUAUAUCGCCAGGGG	CCCCUGGCGAUAUAGGAUC	886	0.610229
NC_004161.1	VP40	AUGAGGCGCGGAGUGUUAC	GUAACACUCCGCGCCUCAU	1	0.610147
NC_004161.1	VP40	UUACCAACGGCUCCUCCAG	CUGGAGGAGCCGUUGGUAA	16	0.610082
NC_004161.1	VP40	AUGCUUCAGACUUAACAUC	GAUGUUAAGUCUGAAGCAU	680	0.607695
NC_004161.1	VP40	CCUAUAUCGCCAGGGGACU	AGUCCCCUGGCGAUAUAGG	889	0.605876
NC_004161.1	VP40	UGAGGCGCGGAGUGUUACC	GGUAACACUCCGCGCCUCA	2	0.605136
NC_004161.1	VP40	ACAGUGAAUGUAAUUUCGG	CCGAAAUUACAUUCACUGU	232	0.604056
NC_004161.1	VP40	CCGGCAAAAAACCACAACC	GGUUGUGGUUUUUUGCCGG	815	0.601439
NC_004161.1	VP40	GGCUUCCACUGGGUGUAGC	GCUACACCCAGUGGAAGCC	284	0.601281
NC_004161.1	VP40	UCAGGCAUUCCUUCAAGAG	CUCUUGAAGGAAUGCCUGA	462	0.598512
NC_004161.1	VP40	AACAACAGCCGCAAUUAUG	CAUAAUUGCGGCUGUUGUU	330	0.598123
NC_004161.1	VP40	CAGGGGCAGAUGUUCCAUC	GAUGGAACAUCUGCCCCUG	125	0.596076
NC_004161.1	VP40	AUGAGACCAGUGGCUGAUG	CAUCAGCCACUGGUCUCAU	151	0.593616
NC_004161.1	VP40	AACCAUUGCCAGCUGCAAC	GUUGCAGCUGGCAAUGGUU	551	0.593578
NC_004161.1	VP40	UUCAACAACAGCCGCAAUU	AAUUGCGGCUGUUGUUGAA	327	0.593519
NC_004161.1	VP40	CACAACCCAAAAAUGGCCA	UGGCCAUUUUUGGGUUGUG	827	0.591792
NC_004161.1	VP40	UGAGCAUACUCCCAACCCG	CGGGUUGGGAGUAUGCUCA	59	0.590952
NC_004161.1	VP40	UACCCUAUGAGCAUACUCC	GGAGUAUGCUCAUAGGGUA	52	0.588793
NC_004161.1	VP40	AAGAACAUAGUUGGAAUUG	CAAUUCCAACUAUGUUCUU	766	0.587237
NC_004161.1	VP40	AAAUUGUCCCGAUUGAUCC	GGAUCAAUCGGGACAAUUU	743	0.587048
NC_004161.1	VP40	CGGCAAAAAACCACAACCC	GGGUUGUGGUUUUUUGCCG	816	0.586539
NC_004161.1	VP40	UUCACAUUUGAUCUAACAG	CUGUUAGAUCAAAUGUGAA	514	0.586010
NC_004161.1	VP40	GUGAUUCAUGCCACUCUCC	GGAGAGUGGCAUGAAUCAC	932	0.584513
NC_004161.1	VP40	GCUCUUCGUCCUGGGCUCU	AGAGCCCAGGACGAAGAGC	604	0.584253
NC_004161.1	VP40	GCUAGGCCCAGGAAUACCC	GGGUAUUCCUGGGCCUAGC	411	0.583997
NC_004161.1	VP40	UAGGCCCAGGAAUACCCGA	UCGGGUAUUCCUGGGCCUA	413	0.582487
NC_004161.1	VP40	AUUGCCAGCUGCAACCUGG	CCAGGUUGCAGCUGGCAAU	555	0.582266
NC_004161.1	VP40	GCAGUCAAUGCUCUUCGUC	GACGAAGAGCAUUGACUGC	595	0.582142
NC_004161.1	VP40	ACCAACGGCUCCUCCAGCA	UGCUGGAGGAGCCGUUGGU	18	0.582036
NC_004161.1	VP40	UCACUCCAUCCCAAGCUUC	GAAGCUUGGGAUGGAGUGA	622	0.581096
NC_004161.1	VP40	AUGAAUGCAAUACCGGACC	GGUCCGGUAUUGCAUUCAU	721	0.580841
NC_004161.1	VP40	UGCCAGGGGCAGAUGUUCC	GGAACAUCUGCCCCUGGCA	122	0.580531
NC_004161.1	VP40	UCGUCCUGGGCUCUCACUC	GAGUGAGAGCCCAGGACGA	609	0.579845
NC_004161.1	VP40	UUCAAGAGUUUGUUCUUCC	GGAAGAACAAACUCUUGAA	473	0.579768
NC_004161.1	VP40	UAAAGCUCAUCACUCAACC	GGUUGAGUGAUGAGCUUUA	536	0.579007
NC_004161.1	VP40	UGCCAGCUGCAACCUGGAC	GUCCAGGUUGCAGCUGGCA	557	0.578676
NC_004161.1	VP40	GGCCCAGGAAUACCCGAUC	GAUCGGGUAUUCCUGGGCC	415	0.578199
NC_004161.1	VP40	UUCCUUCAAGAGUUUGUUC	GAACAAACUCUUGAAGGAA	469	0.577652
NC_004161.1	VP40	AACAUAGUUGGAAUUGAGG	CCUCAAUUCCAACUAUGUU	769	0.575844
NC_004161.1	VP40	AUUGUGAUUCAUGCCACUC	GAGUGGCAUGAAUCACAAU	929	0.574522
NC_004161.1	VP40	AUUUCACAUUUGAUCUAAC	GUUAGAUCAAAUGUGAAAU	512	0.573493
NC_004161.1	VP40	UACGACUCCUAAGGUUGGG	CCCAACCUUAGGAGUCGUA	440	0.572828
NC_004161.1	VP40	UGGCUUCCACUGGGUGUAG	CUACACCCAGUGGAAGCCA	283	0.572637
NC_004161.1	VP40	CCGUAUCACAUGGACAAGC	GCUUGUCCAUGUGAUACGG	961	0.572497
NC_004161.1	VP40	AAACCACAACCCAAAAAUG	CAUUUUUGGGUUGUGGUUU	823	0.572427
NC_004161.1	VP40	UUUAUAUUGGAAGCUACAG	CUGUAGCUUCCAAUAUAAA	217	0.570966
NC_004161.1	VP40	UUGGCUUCCACUGGGUGUA	UACACCCAGUGGAAGCCAA	282	0.570584
NC_004161.1	VP40	ACUGGCAGUGCCAGGGGCA	UGCCCCUGGCACUGCCAGU	114	0.569864
NC_004161.1	VP40	AUAGUUGGAAUUGAGGUUC	GAACCUCAAUUCCAACUAU	772	0.569685
NC_004161.1	VP40	UCUCACUCCAUCCCAAGCU	AGCUUGGGAUGGAGUGAGA	620	0.568187
NC_004161.1	VP40	AAACUCCAGCAGGAGCAGU	ACUGCUCCUGCUGGAGUUU	581	0.568162
NC_004161.1	VP40	AUACCCUAUGAGCAUACUC	GAGUAUGCUCAUAGGGUAU	51	0.566421
NC_004161.1	VP40	CUGGGCUCUCACUCCAUCC	GGAUGGAGUGAGAGCCCAG	614	0.566321
NC_004161.1	VP40	AGUUCAAAGGCUGACCGGC	GCCGGUCAGCCUUUGAACU	801	0.561944
NC_004161.1	VP40	ACCCAAAAAUGGCCAACCA	UGGUUGGCCAUUUUUGGGU	831	0.561222
NC_004161.1	VP40	GUACUGGCAGUGCCAGGGG	CCCCUGGCACUGCCAGUAC	112	0.559177
NC_004161.1	VP40	UCACAUUUGAUCUAACAGC	GCUGUUAGAUCAAAUGUGA	515	0.556912
NC_004161.1	VP40	CCACAACCCAAAAAUGGCC	GGCCAUUUUUGGGUUGUGG	826	0.548713
NC_004161.1	VP40	AUAAUGAUAUUGCAUACCC	GGGUAUGCAAUAUCAUUAU	38	0.546466
NC_004161.1	VP40	UCAUCACUCAACCAUUGCC	GGCAAUGGUUGAGUGAUGA	542	0.545603
NC_004161.1	VP40	UCCAUGAGACCAGUGGCUG	CAGCCACUGGUCUCAUGGA	148	0.544433
NC_004161.1	VP40	UAUUGCAUACCCUAUGAGC	GCUCAUAGGGUAUGCAAUA	45	0.540964
NC_004161.1	VP40	CUCAACCAUUGCCAGCUGC	GCAGCUGGCAAUGGUUGAG	548	0.540045
NC_004161.1	VP40	CUGGCAGUGCCAGGGGCAG	CUGCCCCUGGCACUGCCAG	115	0.539864
NC_004161.1	VP40	CAAUGCUCUUCGUCCUGGG	CCCAGGACGAAGAGCAUUG	600	0.538611
NC_004161.1	VP40	AUGCCACUCUCCAGCCAGC	GCUGGCUGGAGAGUGGCAU	939	0.535579
NC_004161.1	VP40	UGAAUGUAAUUUCGGGAAC	GUUCCCGAAAUUACAUUCA	236	0.533521
NC_004161.1	VP40	ACCAUUGCCAGCUGCAACC	GGUUGCAGCUGGCAAUGGU	552	0.527376
NC_004161.1	VP40	AUUCAAACAAUCAUGAAUG	CAUUCAUGAUUGUUUGAAU	709	0.527221
NC_004161.1	VP40	UCCUAUAUCGCCAGGGGAC	GUCCCCUGGCGAUAUAGGA	888	0.524492
NC_004161.1	VP40	ACCGGCAAAAAACCACAAC	GUUGUGGUUUUUUGCCGGU	814	0.524035
NC_004161.1	VP40	UGCUCUUCGUCCUGGGCUC	GAGCCCAGGACGAAGAGCA	603	0.523720
NC_004161.1	VP40	GUUCUUCCACCAGUCCAGC	GCUGGACUGGUGGAAGAAC	484	0.517635
NC_004161.1	VP40	AACAGCUCUAAAGCUCAUC	GAUGAGCUUUAGAGCUGUU	528	0.517105
NC_004161.1	VP40	UGGGCUCUCACUCCAUCCC	GGGAUGGAGUGAGAGCCCA	615	0.513386
NC_004161.1	VP40	UCUGCCUUUAUAUUGGAAG	CUUCCAAUAUAAAGGCAGA	211	0.511249
NC_004161.1	VP40	AACCACAACCCAAAAAUGG	CCAUUUUUGGGUUGUGGUU	824	0.510530
NC_004161.1	VP40	UCACCCAGGAUUGUGAUUC	GAAUCACAAUCCUGGGUGA	920	0.508974
NC_004161.1	VP40	CUCUUCGUCCUGGGCUCUC	GAGAGCCCAGGACGAAGAG	605	0.508656
NC_004161.1	VP40	UUAACUAUGGUUAUCACCC	GGGUGAUAACCAUAGUUAA	907	0.508148
NC_004161.1	VP40	AUUCUCCUGCCGGGGAAGA	UCUUCCCCGGCAGGAGAAU	646	0.502835
NC_004161.1	VP40	ACCACAACCCAAAAAUGGC	GCCAUUUUUGGGUUGUGGU	825	0.501952
NC_004161.1	VP40	UUCUUCCACCAGUCCAGCU	AGCUGGACUGGUGGAAGAA	485	0.496659
NC_004161.1	VP40	UCCUGCCGGGGAAGACAGG	CCUGUCUUCCCCGGCAGGA	650	0.494731
NC_004161.1	VP40	UUCUUCCGAAAUAUGUUGG	CCAACAUAUUUCGGAAGAA	863	0.493416
NC_004161.1	VP40	ACGACUCCUAAGGUUGGGC	GCCCAACCUUAGGAGUCGU	441	0.492695
NC_004161.1	VP40	UAAGGUUGGGCAAUCAGGC	GCCUGAUUGCCCAACCUUA	449	0.492150
NC_004161.1	VP40	UAUAAUGAUAUUGCAUACC	GGUAUGCAAUAUCAUUAUA	37	0.489545
NC_004161.1	VP40	CAACCCAAAAAUGGCCAAC	GUUGGCCAUUUUUGGGUUG	829	0.488738
NC_004161.1	VP40	UCCACCAGUCCAGCUUCCC	GGGAAGCUGGACUGGUGGA	489	0.488567
NC_004161.1	VP40	UUUGGCUUCCACUGGGUGU	ACACCCAGUGGAAGCCAAA	281	0.483706
NC_004161.1	VP40	UACCAACGGCUCCUCCAGC	GCUGGAGGAGCCGUUGGUA	17	0.479669
NC_004161.1	VP40	UCAACAGGCUAGGCCCAGG	CCUGGGCCUAGCCUGUUGA	404	0.476366
NC_004161.1	VP40	UUUGUUCUUCCACCAGUCC	GGACUGGUGGAAGAACAAA	481	0.471178
NC_004161.1	VP40	AAUGGCCAACCAAUUAUUC	GAAUAAUUGGUUGGCCAUU	838	0.469172
NC_004161.1	VP40	UUGAUUCAACAACAGCCGC	GCGGCUGUUGUUGAAUCAA	323	0.468607
NC_004161.1	VP40	UUCGUCCUGGGCUCUCACU	AGUGAGAGCCCAGGACGAA	608	0.466731
NC_004161.1	VP40	UUCCACCAGUCCAGCUUCC	GGAAGCUGGACUGGUGGAA	488	0.463785
NC_004161.1	VP40	UCAAUGCUCUUCGUCCUGG	CCAGGACGAAGAGCAUUGA	599	0.461905
NC_004161.1	VP40	AAUUCUCCUGCCGGGGAAG	CUUCCCCGGCAGGAGAAUU	645	0.460684
NC_004161.1	VP40	CUAGGCCCAGGAAUACCCG	CGGGUAUUCCUGGGCCUAG	412	0.460606
NC_004161.1	VP40	UUCAAACAAUCAUGAAUGC	GCAUUCAUGAUUGUUUGAA	710	0.460216
NC_004161.1	VP40	AUGGCCAACCAAUUAUUCC	GGAAUAAUUGGUUGGCCAU	839	0.460044
NC_004161.1	VP40	AUUCAUGCCACUCUCCAGC	GCUGGAGAGUGGCAUGAAU	935	0.448708
NC_004161.1	VP40	UUGGGCAAUCAGGCAUUCC	GGAAUGCCUGAUUGCCCAA	454	0.447012
NC_004161.1	VP40	AUACUCCAAGCGGAGUAGC	GCUACUCCGCUUGGAGUAU	191	0.436855
NC_004161.1	VP40	UAUGAGCAUACUCCCAACC	GGUUGGGAGUAUGCUCAUA	57	0.435285
NC_004161.1	VP40	UGAUCCUAUAUCGCCAGGG	CCCUGGCGAUAUAGGAUCA	885	0.427880
NC_004161.1	VP40	UUCUCCUGCCGGGGAAGAC	GUCUUCCCCGGCAGGAGAA	647	0.419938
NC_004161.1	VP40	AAUGCUCUUCGUCCUGGGC	GCCCAGGACGAAGAGCAUU	601	0.374817
NC_004161.1	VP40	AUGCUCUUCGUCCUGGGCU	AGCCCAGGACGAAGAGCAU	602	0.358959
NC_004161.1	VP40	UUCAUGCCACUCUCCAGCC	GGCUGGAGAGUGGCAUGAA	936	0.355345
NC_004161.1	VP40	AACCCAAAAAUGGCCAACC	GGUUGGCCAUUUUUGGGUU	830	0.259039

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