EbolaVCR: Computational resources for designing drugs and vaccines against EBOLA virus

Welcome to Home page of EbolaVCR

Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.

Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.

Strain	Gene	mRNA	siRNA	Position	Efficacy
Result
NC_002549.1	VP40	GAAGGUGACUUCUAAAAAU	AUUUUUAGAAGUCACCUUC	822	1.097182
NC_002549.1	VP40	GUAAGAAGGUGACUUCUAA	UUAGAAGUCACCUUCUUAC	818	1.058512
NC_002549.1	VP40	GGUAAGAAGGUGACUUCUA	UAGAAGUCACCUUCUUACC	817	1.040837
NC_002549.1	VP40	AGAAGGUGACUUCUAAAAA	UUUUUAGAAGUCACCUUCU	821	1.040128
NC_002549.1	VP40	CAAUAAUGACUUCACUCCA	UGGAGUGAAGUCAUUAUUG	716	1.037400
NC_002549.1	VP40	CAAAGUGCUAAUGAAGCAA	UUGCUUCAUUAGCACUUUG	255	1.028978
NC_002549.1	VP40	CAUUCAUCCUUGAAGCUAU	AUAGCUUCAAGGAUGAAUG	215	1.024460
NC_002549.1	VP40	GGUGACUUCUAAAAAUGGA	UCCAUUUUUAGAAGUCACC	825	1.019099
NC_002549.1	VP40	GACUUCUAAAAAUGGACAA	UUGUCCAUUUUUAGAAGUC	828	1.013072
NC_002549.1	VP40	CUUCACUCCAGGACUUUAA	UUAAAGUCCUGGAGUGAAG	725	1.008550
NC_002549.1	VP40	GCUGAUCAAAAGACCUACA	UGUAGGUCUUUUGAUCAGC	301	1.006823
NC_002549.1	VP40	CCCAGUAUUUCACCUUUGA	UCAAAGGUGAAAUACUGGG	506	0.994898
NC_002549.1	VP40	CGGAGAAAAUCCAAGCAAU	AUUGCUUGGAUUUUCUCCG	701	0.992134
NC_002549.1	VP40	AAAGUGCUAAUGAAGCAAA	UUUGCUUCAUUAGCACUUU	256	0.991974
NC_002549.1	VP40	AGCUAUGGUGAAUGUCAUA	UAUGACAUUCACCAUAGCU	228	0.989547
NC_002549.1	VP40	CAGAAACUCUGGUCCACAA	UUGUGGACCAGAGUUUCUG	791	0.985150
NC_002549.1	VP40	GGAAUUUCAUUUCAUCCAA	UUGGAUGAAAUGAAAUUCC	616	0.984779
NC_002549.1	VP40	AAGAAGGUGACUUCUAAAA	UUUUAGAAGUCACCUUCUU	820	0.980676
NC_002549.1	VP40	GAAGCUAUGGUGAAUGUCA	UGACAUUCACCAUAGCUUC	226	0.976979
NC_002549.1	VP40	GCUAAUGAAGCAAAUUCCA	UGGAAUUUGCUUCAUUAGC	261	0.974372
NC_002549.1	VP40	GGUGUCGCUGAUCAAAAGA	UCUUUUGAUCAGCGACACC	295	0.973146
NC_002549.1	VP40	ACUUCACUCCAGGACUUUA	UAAAGUCCUGGAGUGAAGU	724	0.972439
NC_002549.1	VP40	ACCUACAGCUUUGACUCAA	UUGAGUCAAAGCUGUAGGU	313	0.971021
NC_002549.1	VP40	UAAGAAGGUGACUUCUAAA	UUUAGAAGUCACCUUCUUA	819	0.966383
NC_002549.1	VP40	GGAGAAAAUCCAAGCAAUA	UAUUGCUUGGAUUUUCUCC	702	0.960206
NC_002549.1	VP40	CCAAAGUGCUAAUGAAGCA	UGCUUCAUUAGCACUUUGG	254	0.956379
NC_002549.1	VP40	CGGUAAGAAGGUGACUUCU	AGAAGUCACCUUCUUACCG	816	0.950745
NC_002549.1	VP40	CUAAUGAAGCAAAUUCCAA	UUGGAAUUUGCUUCAUUAG	262	0.950426
NC_002549.1	VP40	GACCUACAGCUUUGACUCA	UGAGUCAAAGCUGUAGGUC	312	0.949694
NC_002549.1	VP40	CACACCAGGCAGUGUGUCA	UGACACACUGCCUGGUGUG	192	0.948528
NC_002549.1	VP40	CUAAAAAUGGACAACCAAU	AUUGGUUGUCCAUUUUUAG	833	0.939121
NC_002549.1	VP40	UCUAGGUGUCGCUGAUCAA	UUGAUCAGCGACACCUAGA	291	0.938606
NC_002549.1	VP40	GGGGAACAGUGCCGAUCUA	UAGAUCGGCACUGUUCCCC	675	0.938479
NC_002549.1	VP40	CAUAUACCCUGUCAGGUCA	UGACCUGACAGGGUAUAUG	48	0.937519
NC_002549.1	VP40	CCAAGCAAUAAUGACUUCA	UGAAGUCAUUAUUGCUUGG	711	0.935669
NC_002549.1	VP40	UGAUUUGACAGCACUCAAA	UUUGAGUGCUGUCAAAUCA	522	0.934152
NC_002549.1	VP40	CCAUCAUGCUUGCUUCAUA	UAUGAAGCAAGCAUGAUGG	341	0.930694
NC_002549.1	VP40	GCAUUCAUCCUUGAAGCUA	UAGCUUCAAGGAUGAAUGC	214	0.927441
NC_002549.1	VP40	ACUCAAACUGAUCACCCAA	UUGGGUGAUCAGUUUGAGU	534	0.926760
NC_002549.1	VP40	AGUGCUAAUGAAGCAAAUU	AAUUUGCUUCAUUAGCACU	258	0.924325
NC_002549.1	VP40	ACGUGUCAUUCUCCUGCAA	UUGCAGGAGAAUGACACGU	937	0.920765
NC_002549.1	VP40	CAACUACCCCAGUAUUUCA	UGAAAUACUGGGGUAGUUG	499	0.920225
NC_002549.1	VP40	UUGAUUUGACAGCACUCAA	UUGAGUGCUGUCAAAUCAA	521	0.918712
NC_002549.1	VP40	GAGAAAAUCCAAGCAAUAA	UUAUUGCUUGGAUUUUCUC	703	0.917456
NC_002549.1	VP40	GGACUUUAAGAUCGUUCCA	UGGAACGAUCUUAAAGUCC	735	0.915660
NC_002549.1	VP40	AGAAAAUCCAAGCAAUAAU	AUUAUUGCUUGGAUUUUCU	704	0.914929
NC_002549.1	VP40	CAAUUGCUAGAGGUGGCAA	UUGCCACCUCUAGCAAUUG	74	0.913714
NC_002549.1	VP40	AAGUGCUAAUGAAGCAAAU	AUUUGCUUCAUUAGCACUU	257	0.912623
NC_002549.1	VP40	AUAUACCCUGUCAGGUCAA	UUGACCUGACAGGGUAUAU	49	0.912219
NC_002549.1	VP40	CAAUUGAUCCAACCAAAAA	UUUUUGGUUGGAUCAAUUG	752	0.910384
NC_002549.1	VP40	CUAGGUGUCGCUGAUCAAA	UUUGAUCAGCGACACCUAG	292	0.910341
NC_002549.1	VP40	CACACACCAGGCAGUGUGU	ACACACUGCCUGGUGUGUG	190	0.903263
NC_002549.1	VP40	GGGAACAGUGCCGAUCUAA	UUAGAUCGGCACUGUUCCC	676	0.902544
NC_002549.1	VP40	UCGCUGAUCAAAAGACCUA	UAGGUCUUUUGAUCAGCGA	299	0.901723
NC_002549.1	VP40	UGACUUCUAAAAAUGGACA	UGUCCAUUUUUAGAAGUCA	827	0.899851
NC_002549.1	VP40	GAAUUUCAUUUCAUCCAAA	UUUGGAUGAAAUGAAAUUC	617	0.899755
NC_002549.1	VP40	CACUCAAACUGAUCACCCA	UGGGUGAUCAGUUUGAGUG	533	0.897963
NC_002549.1	VP40	UCCAAUUUGGCUUCCUCUA	UAGAGGAAGCCAAAUUGGA	276	0.895354
NC_002549.1	VP40	UCCAAUUGAUCCAACCAAA	UUUGGUUGGAUCAAUUGGA	750	0.894180
NC_002549.1	VP40	AGUCAAUGGGGACACUCCA	UGGAGUGUCCCCAUUGACU	123	0.892834
NC_002549.1	VP40	UCUAAAAAUGGACAACCAA	UUGGUUGUCCAUUUUUAGA	832	0.892546
NC_002549.1	VP40	CUAACAUCUCCGGAGAAAA	UUUUCUCCGGAGAUGUUAG	691	0.891181
NC_002549.1	VP40	AUGCUUGCUUCAUACACUA	UAGUGUAUGAAGCAAGCAU	346	0.890476
NC_002549.1	VP40	GCGUCCAGGAAUUUCAUUU	AAAUGAAAUUCCUGGACGC	609	0.890251
NC_002549.1	VP40	CAAAAGACCUACAGCUUUG	CAAAGCUGUAGGUCUUUUG	307	0.888102
NC_002549.1	VP40	CGCUGAUCAAAAGACCUAC	GUAGGUCUUUUGAUCAGCG	300	0.885312
NC_002549.1	VP40	AAGCUAUGGUGAAUGUCAU	AUGACAUUCACCAUAGCUU	227	0.884285
NC_002549.1	VP40	GGAGCGUUGCGUCCAGGAA	UUCCUGGACGCAACGCUCC	601	0.883783
NC_002549.1	VP40	CCGGAGAAAAUCCAAGCAA	UUGCUUGGAUUUUCUCCGG	700	0.883590
NC_002549.1	VP40	ACCCCAGUAUUUCACCUUU	AAAGGUGAAAUACUGGGGU	504	0.882912
NC_002549.1	VP40	UCAAAAGACCUACAGCUUU	AAAGCUGUAGGUCUUUUGA	306	0.881068
NC_002549.1	VP40	GUUGCGUCCAGGAAUUUCA	UGAAAUUCCUGGACGCAAC	606	0.879638
NC_002549.1	VP40	AAGCAAUAAUGACUUCACU	AGUGAAGUCAUUAUUGCUU	713	0.877918
NC_002549.1	VP40	UACCCUGUCAGGUCAAAUU	AAUUUGACCUGACAGGGUA	52	0.877467
NC_002549.1	VP40	GUCGCUGAUCAAAAGACCU	AGGUCUUUUGAUCAGCGAC	298	0.876852
NC_002549.1	VP40	UACAGCUUUGACUCAACUA	UAGUUGAGUCAAAGCUGUA	316	0.875184
NC_002549.1	VP40	CCAAUUGAUCCAACCAAAA	UUUUGGUUGGAUCAAUUGG	751	0.875181
NC_002549.1	VP40	GUCCAGGAAUUUCAUUUCA	UGAAAUGAAAUUCCUGGAC	611	0.874714
NC_002549.1	VP40	AGGUGUCGCUGAUCAAAAG	CUUUUGAUCAGCGACACCU	294	0.874333
NC_002549.1	VP40	CAGUAUUUCACCUUUGAUU	AAUCAAAGGUGAAAUACUG	508	0.874230
NC_002549.1	VP40	GAAGGGGAACAGUGCCGAU	AUCGGCACUGUUCCCCUUC	672	0.874047
NC_002549.1	VP40	CUCUAGGUGUCGCUGAUCA	UGAUCAGCGACACCUAGAG	290	0.869377
NC_002549.1	VP40	CUAUCACCCAUUUCGGCAA	UUGCCGAAAUGGGUGAUAG	362	0.867881
NC_002549.1	VP40	CUACAGCUUUGACUCAACU	AGUUGAGUCAAAGCUGUAG	315	0.867090
NC_002549.1	VP40	GAUCAAAAGACCUACAGCU	AGCUGUAGGUCUUUUGAUC	304	0.866621
NC_002549.1	VP40	UGACAGCACUCAAACUGAU	AUCAGUUUGAGUGCUGUCA	527	0.866383
NC_002549.1	VP40	GACUUCACUCCAGGACUUU	AAAGUCCUGGAGUGAAGUC	723	0.866171
NC_002549.1	VP40	GAUCUAACAUCUCCGGAGA	UCUCCGGAGAUGUUAGAUC	688	0.864243
NC_002549.1	VP40	CUGAAUAUAUGGAGGCCAU	AUGGCCUCCAUAUAUUCAG	32	0.863113
NC_002549.1	VP40	GAUCGUUCCAAUUGAUCCA	UGGAUCAAUUGGAACGAUC	744	0.862144
NC_002549.1	VP40	GCUAUGGUGAAUGUCAUAU	AUAUGACAUUCACCAUAGC	229	0.861955
NC_002549.1	VP40	GAGUCAGUCAAUGGGGACA	UGUCCCCAUUGACUGACUC	118	0.861070
NC_002549.1	VP40	CCUUGAAGCUAUGGUGAAU	AUUCACCAUAGCUUCAAGG	222	0.860465
NC_002549.1	VP40	CCAGUAUUUCACCUUUGAU	AUCAAAGGUGAAAUACUGG	507	0.859858
NC_002549.1	VP40	GAAUAUAUGGAGGCCAUAU	AUAUGGCCUCCAUAUAUUC	34	0.858973
NC_002549.1	VP40	GACUUUAAGAUCGUUCCAA	UUGGAACGAUCUUAAAGUC	736	0.858828
NC_002549.1	VP40	AGGAAUUUCAUUUCAUCCA	UGGAUGAAAUGAAAUUCCU	615	0.858828
NC_002549.1	VP40	CUGACCGGUAAGAAGGUGA	UCACCUUCUUACCGGUCAG	811	0.858051
NC_002549.1	VP40	CCUUUGAUUUGACAGCACU	AGUGCUGUCAAAUCAAAGG	518	0.857165
NC_002549.1	VP40	UUGACAGCACUCAAACUGA	UCAGUUUGAGUGCUGUCAA	526	0.856862
NC_002549.1	VP40	UAUACCCUGUCAGGUCAAA	UUUGACCUGACAGGGUAUA	50	0.855407
NC_002549.1	VP40	UAAUGACUUCACUCCAGGA	UCCUGGAGUGAAGUCAUUA	719	0.855078
NC_002549.1	VP40	GCGUUGCGUCCAGGAAUUU	AAAUUCCUGGACGCAACGC	604	0.854228
NC_002549.1	VP40	AAGGUGACUUCUAAAAAUG	CAUUUUUAGAAGUCACCUU	823	0.853792
NC_002549.1	VP40	ACACCAGGCAGUGUGUCAU	AUGACACACUGCCUGGUGU	193	0.852991
NC_002549.1	VP40	CGUUCUUCCGCCAGUCCAA	UUGGACUGGCGGAAGAACG	483	0.852474
NC_002549.1	VP40	CCUACAGCUUUGACUCAAC	GUUGAGUCAAAGCUGUAGG	314	0.851178
NC_002549.1	VP40	GACCGGUAAGAAGGUGACU	AGUCACCUUCUUACCGGUC	813	0.850472
NC_002549.1	VP40	CGGAGUCAGUCAAUGGGGA	UCCCCAUUGACUGACUCCG	116	0.849930
NC_002549.1	VP40	AAAAGACCUACAGCUUUGA	UCAAAGCUGUAGGUCUUUU	308	0.849477
NC_002549.1	VP40	CAAGCAAUAAUGACUUCAC	GUGAAGUCAUUAUUGCUUG	712	0.847932
NC_002549.1	VP40	CCAAUUUGGCUUCCUCUAG	CUAGAGGAAGCCAAAUUGG	277	0.846325
NC_002549.1	VP40	AUCAAAAGACCUACAGCUU	AAGCUGUAGGUCUUUUGAU	305	0.843587
NC_002549.1	VP40	UAGGUGUCGCUGAUCAAAA	UUUUGAUCAGCGACACCUA	293	0.842746
NC_002549.1	VP40	GUCCAACUACCCCAGUAUU	AAUACUGGGGUAGUUGGAC	496	0.839270
NC_002549.1	VP40	CCAGAAACUCUGGUCCACA	UGUGGACCAGAGUUUCUGG	790	0.837733
NC_002549.1	VP40	CUGCCUGCUGCAACAUGGA	UCCAUGUUGCAGCAGGCAG	556	0.836582
NC_002549.1	VP40	GAGGCCAUAUACCCUGUCA	UGACAGGGUAUAUGGCCUC	43	0.835534
NC_002549.1	VP40	CGGGUUAUAUUGCCUACUG	CAGUAGGCAAUAUAACCCG	7	0.834776
NC_002549.1	VP40	CGGCAAGGCAACCAAUCCA	UGGAUUGGUUGCCUUGCCG	375	0.832259
NC_002549.1	VP40	ACAGCACUCAAACUGAUCA	UGAUCAGUUUGAGUGCUGU	529	0.830680
NC_002549.1	VP40	CGCCAGUCCAACUACCCCA	UGGGGUAGUUGGACUGGCG	491	0.830134
NC_002549.1	VP40	UCCUCUAGGUGUCGCUGAU	AUCAGCGACACCUAGAGGA	288	0.826322
NC_002549.1	VP40	CCCCAGUAUUUCACCUUUG	CAAAGGUGAAAUACUGGGG	505	0.825827
NC_002549.1	VP40	AAUCCAAGCAAUAAUGACU	AGUCAUUAUUGCUUGGAUU	708	0.825735
NC_002549.1	VP40	CAGCUUUGACUCAACUACG	CGUAGUUGAGUCAAAGCUG	318	0.825365
NC_002549.1	VP40	CACCUUUGAUUUGACAGCA	UGCUGUCAAAUCAAAGGUG	516	0.822936
NC_002549.1	VP40	CCGGUAAGAAGGUGACUUC	GAAGUCACCUUCUUACCGG	815	0.822426
NC_002549.1	VP40	CGCCAUCAUGCUUGCUUCA	UGAAGCAAGCAUGAUGGCG	339	0.821393
NC_002549.1	VP40	GUGACUUCUAAAAAUGGAC	GUCCAUUUUUAGAAGUCAC	826	0.821342
NC_002549.1	VP40	ACUUUAAGAUCGUUCCAAU	AUUGGAACGAUCUUAAAGU	737	0.820261
NC_002549.1	VP40	AAAGUGGGAAGAAGGGGAA	UUCCCCUUCUUCCCACUUU	662	0.819737
NC_002549.1	VP40	ACCCAUUUCGGCAAGGCAA	UUGCCUUGCCGAAAUGGGU	367	0.817008
NC_002549.1	VP40	UGACUUCACUCCAGGACUU	AAGUCCUGGAGUGAAGUCA	722	0.815724
NC_002549.1	VP40	CCCCAAAGUGCUAAUGAAG	CUUCAUUAGCACUUUGGGG	252	0.815511
NC_002549.1	VP40	AGCGUUGCGUCCAGGAAUU	AAUUCCUGGACGCAACGCU	603	0.815222
NC_002549.1	VP40	AGUAUUUCACCUUUGAUUU	AAAUCAAAGGUGAAAUACU	509	0.813005
NC_002549.1	VP40	AGCUUUGACUCAACUACGG	CCGUAGUUGAGUCAAAGCU	319	0.810989
NC_002549.1	VP40	GACACGUGUCAUUCUCCUG	CAGGAGAAUGACACGUGUC	934	0.809830
NC_002549.1	VP40	UAAUGAAGCAAAUUCCAAU	AUUGGAAUUUGCUUCAUUA	263	0.809577
NC_002549.1	VP40	GUGUCAUUCUCCUGCAAGU	ACUUGCAGGAGAAUGACAC	939	0.808328
NC_002549.1	VP40	GUCAGUCAAUGGGGACACU	AGUGUCCCCAUUGACUGAC	120	0.807691
NC_002549.1	VP40	GUUCCAAUUGAUCCAACCA	UGGUUGGAUCAAUUGGAAC	748	0.805989
NC_002549.1	VP40	AGGUGACUUCUAAAAAUGG	CCAUUUUUAGAAGUCACCU	824	0.805739
NC_002549.1	VP40	CCUCCAGGAGUUCGUUCUU	AAGAACGAACUCCUGGAGG	471	0.805184
NC_002549.1	VP40	CGCCCCAUUCUUUUACCCA	UGGGUAAAAGAAUGGGGCG	640	0.804874
NC_002549.1	VP40	CCAACAGGAUCAAAUGGAG	CUCCAUUUGAUCCUGUUGG	586	0.804864
NC_002549.1	VP40	GGGAAGAAGGGGAACAGUG	CACUGUUCCCCUUCUUCCC	667	0.804850
NC_002549.1	VP40	GUGCUAAUGAAGCAAAUUC	GAAUUUGCUUCAUUAGCAC	259	0.803042
NC_002549.1	VP40	CAUGCUUGCUUCAUACACU	AGUGUAUGAAGCAAGCAUG	345	0.801629
NC_002549.1	VP40	AGAAACUCUGGUCCACAAG	CUUGUGGACCAGAGUUUCU	792	0.800191
NC_002549.1	VP40	AGUCCAACUACCCCAGUAU	AUACUGGGGUAGUUGGACU	495	0.798581
NC_002549.1	VP40	UAAGAUCGUUCCAAUUGAU	AUCAAUUGGAACGAUCUUA	741	0.797867
NC_002549.1	VP40	ACAGCUUUGACUCAACUAC	GUAGUUGAGUCAAAGCUGU	317	0.797660
NC_002549.1	VP40	UCCUUGAAGCUAUGGUGAA	UUCACCAUAGCUUCAAGGA	221	0.795061
NC_002549.1	VP40	AUACCCUGUCAGGUCAAAU	AUUUGACCUGACAGGGUAU	51	0.793864
NC_002549.1	VP40	ACAAUUGCUAGAGGUGGCA	UGCCACCUCUAGCAAUUGU	73	0.793113
NC_002549.1	VP40	AGUGGGAAGAAGGGGAACA	UGUUCCCCUUCUUCCCACU	664	0.792883
NC_002549.1	VP40	AAAAUGGACAACCAAUCAU	AUGAUUGGUUGUCCAUUUU	836	0.792464
NC_002549.1	VP40	UUCUAAAAAUGGACAACCA	UGGUUGUCCAUUUUUAGAA	831	0.792234
NC_002549.1	VP40	CCAAAAAUAUCAUGGGAAU	AUUCCCAUGAUAUUUUUGG	764	0.792137
NC_002549.1	VP40	GAUUUGACAGCACUCAAAC	GUUUGAGUGCUGUCAAAUC	523	0.790861
NC_002549.1	VP40	AGGCUUUCCUCCAGGAGUU	AACUCCUGGAGGAAAGCCU	464	0.790842
NC_002549.1	VP40	GUCAAUGGGGACACUCCAU	AUGGAGUGUCCCCAUUGAC	124	0.790263
NC_002549.1	VP40	CACGUGUCAUUCUCCUGCA	UGCAGGAGAAUGACACGUG	936	0.790234
NC_002549.1	VP40	GGAAGAAGGGGAACAGUGC	GCACUGUUCCCCUUCUUCC	668	0.790095
NC_002549.1	VP40	AGCUGACCGGUAAGAAGGU	ACCUUCUUACCGGUCAGCU	809	0.789972
NC_002549.1	VP40	AUCUCCGGAGAAAAUCCAA	UUGGAUUUUCUCCGGAGAU	696	0.789750
NC_002549.1	VP40	GCGGGUUAUAUUGCCUACU	AGUAGGCAAUAUAACCCGC	6	0.789520
NC_002549.1	VP40	AAAAAUGGACAACCAAUCA	UGAUUGGUUGUCCAUUUUU	835	0.787609
NC_002549.1	VP40	CUUUAAGAUCGUUCCAAUU	AAUUGGAACGAUCUUAAAG	738	0.787604
NC_002549.1	VP40	CCGAUCUAACAUCUCCGGA	UCCGGAGAUGUUAGAUCGG	686	0.785388
NC_002549.1	VP40	AAUAAUGACUUCACUCCAG	CUGGAGUGAAGUCAUUAUU	717	0.783677
NC_002549.1	VP40	GAGCGUUGCGUCCAGGAAU	AUUCCUGGACGCAACGCUC	602	0.783591
NC_002549.1	VP40	ACCCUGUCAGGUCAAAUUC	GAAUUUGACCUGACAGGGU	53	0.783441
NC_002549.1	VP40	UUCCAAUUGAUCCAACCAA	UUGGUUGGAUCAAUUGGAA	749	0.781816
NC_002549.1	VP40	CCAUAUACCCUGUCAGGUC	GACCUGACAGGGUAUAUGG	47	0.781255
NC_002549.1	VP40	GGCCCCAAAGUGCUAAUGA	UCAUUAGCACUUUGGGGCC	250	0.781074
NC_002549.1	VP40	AGAAGGGGAACAGUGCCGA	UCGGCACUGUUCCCCUUCU	671	0.778852
NC_002549.1	VP40	AUUUCGGCAAGGCAACCAA	UUGGUUGCCUUGCCGAAAU	371	0.778637
NC_002549.1	VP40	AAAAGUGGGAAGAAGGGGA	UCCCCUUCUUCCCACUUUU	661	0.777878
NC_002549.1	VP40	CACCAGGCAGUGUGUCAUC	GAUGACACACUGCCUGGUG	194	0.776832
NC_002549.1	VP40	GCUUCCUCUAGGUGUCGCU	AGCGACACCUAGAGGAAGC	285	0.776589
NC_002549.1	VP40	UCCAGGAAUUUCAUUUCAU	AUGAAAUGAAAUUCCUGGA	612	0.775913
NC_002549.1	VP40	GUCAUUCUCCUGCAAGUCU	AGACUUGCAGGAGAAUGAC	941	0.773257
NC_002549.1	VP40	ACCGGUAAGAAGGUGACUU	AAGUCACCUUCUUACCGGU	814	0.772203
NC_002549.1	VP40	GACAACCAAUCAUCCCUGU	ACAGGGAUGAUUGGUUGUC	842	0.771841
NC_002549.1	VP40	GUGUCGCUGAUCAAAAGAC	GUCUUUUGAUCAGCGACAC	296	0.771524
NC_002549.1	VP40	CUGAUCAAAAGACCUACAG	CUGUAGGUCUUUUGAUCAG	302	0.771152
NC_002549.1	VP40	CAGUCCAACUACCCCAGUA	UACUGGGGUAGUUGGACUG	494	0.770549
NC_002549.1	VP40	ACUCAACUACGGCCGCCAU	AUGGCGGCCGUAGUUGAGU	326	0.769961
NC_002549.1	VP40	CAGGAGACCUCACCAUGGU	ACCAUGGUGAGGUCUCCUG	899	0.769196
NC_002549.1	VP40	GCAAUAAUGACUUCACUCC	GGAGUGAAGUCAUUAUUGC	715	0.769100
NC_002549.1	VP40	AACCAAUCAUCCCUGUUCU	AGAACAGGGAUGAUUGGUU	845	0.767799
NC_002549.1	VP40	CAAUCGGCUGGGUCCUGGA	UCCAGGACCCAGCCGAUUG	405	0.767728
NC_002549.1	VP40	AACUGAUCACCCAACCACU	AGUGGUUGGGUGAUCAGUU	539	0.766357
NC_002549.1	VP40	AGACCUACAGCUUUGACUC	GAGUCAAAGCUGUAGGUCU	311	0.764916
NC_002549.1	VP40	CAGGAUCAAAUGGAGCGUU	AACGCUCCAUUUGAUCCUG	590	0.764751
NC_002549.1	VP40	UUAAGAUCGUUCCAAUUGA	UCAAUUGGAACGAUCUUAA	740	0.764095
NC_002549.1	VP40	UGCCAGAAACUCUGGUCCA	UGGACCAGAGUUUCUGGCA	788	0.762833
NC_002549.1	VP40	AGGCCAUAUACCCUGUCAG	CUGACAGGGUAUAUGGCCU	44	0.762509
NC_002549.1	VP40	CUACCCCAGUAUUUCACCU	AGGUGAAAUACUGGGGUAG	502	0.762260
NC_002549.1	VP40	AGGAUCAAAUGGAGCGUUG	CAACGCUCCAUUUGAUCCU	591	0.760053
NC_002549.1	VP40	AGCAUUCAUCCUUGAAGCU	AGCUUCAAGGAUGAAUGCU	213	0.759539
NC_002549.1	VP40	CAUCAUGCUUGCUUCAUAC	GUAUGAAGCAAGCAUGAUG	342	0.759170
NC_002549.1	VP40	UGAAUAUAUGGAGGCCAUA	UAUGGCCUCCAUAUAUUCA	33	0.758919
NC_002549.1	VP40	CGUUGCGUCCAGGAAUUUC	GAAAUUCCUGGACGCAACG	605	0.758151
NC_002549.1	VP40	GAAAAUCCAAGCAAUAAUG	CAUUAUUGCUUGGAUUUUC	705	0.757715
NC_002549.1	VP40	CACCCAUUUCGGCAAGGCA	UGCCUUGCCGAAAUGGGUG	366	0.756749
NC_002549.1	VP40	UAACAUCUCCGGAGAAAAU	AUUUUCUCCGGAGAUGUUA	692	0.756369
NC_002549.1	VP40	CAACUACGGCCGCCAUCAU	AUGAUGGCGGCCGUAGUUG	329	0.755662
NC_002549.1	VP40	CAUCUCCGGAGAAAAUCCA	UGGAUUUUCUCCGGAGAUG	695	0.755339
NC_002549.1	VP40	CAACCACUGCCUGCUGCAA	UUGCAGCAGGCAGUGGUUG	550	0.754205
NC_002549.1	VP40	CUUUGAUUUGACAGCACUC	GAGUGCUGUCAAAUCAAAG	519	0.751786
NC_002549.1	VP40	GCCAUCAUGCUUGCUUCAU	AUGAAGCAAGCAUGAUGGC	340	0.751673
NC_002549.1	VP40	AAUUGAUCCAACCAAAAAU	AUUUUUGGUUGGAUCAAUU	753	0.751627
NC_002549.1	VP40	CAAACUGAUCACCCAACCA	UGGUUGGGUGAUCAGUUUG	537	0.751489
NC_002549.1	VP40	UACCCCAGUAUUUCACCUU	AAGGUGAAAUACUGGGGUA	503	0.747719
NC_002549.1	VP40	CAUCCUUGAAGCUAUGGUG	CACCAUAGCUUCAAGGAUG	219	0.747367
NC_002549.1	VP40	GACUCAACUACGGCCGCCA	UGGCGGCCGUAGUUGAGUC	325	0.746949
NC_002549.1	VP40	GGAUCAAAUGGAGCGUUGC	GCAACGCUCCAUUUGAUCC	592	0.746907
NC_002549.1	VP40	ACAACCAAUCAUCCCUGUU	AACAGGGAUGAUUGGUUGU	843	0.744800
NC_002549.1	VP40	CGUCCAGGAAUUUCAUUUC	GAAAUGAAAUUCCUGGACG	610	0.744474
NC_002549.1	VP40	CCACACACCAGGCAGUGUG	CACACUGCCUGGUGUGUGG	189	0.744248
NC_002549.1	VP40	UCAUUCUCCUGCAAGUCUU	AAGACUUGCAGGAGAAUGA	942	0.744157
NC_002549.1	VP40	CGGUGGCUCCAGGAGACCU	AGGUCUCCUGGAGCCACCG	890	0.743376
NC_002549.1	VP40	CUAUGGUGAAUGUCAUAUC	GAUAUGACAUUCACCAUAG	230	0.742590
NC_002549.1	VP40	AAUAUAUGGAGGCCAUAUA	UAUAUGGCCUCCAUAUAUU	35	0.742315
NC_002549.1	VP40	AUUUGACAGCACUCAAACU	AGUUUGAGUGCUGUCAAAU	524	0.741894
NC_002549.1	VP40	CAGCACUCAAACUGAUCAC	GUGAUCAGUUUGAGUGCUG	530	0.741779
NC_002549.1	VP40	AAGACCUACAGCUUUGACU	AGUCAAAGCUGUAGGUCUU	310	0.741342
NC_002549.1	VP40	AGGGGAACAGUGCCGAUCU	AGAUCGGCACUGUUCCCCU	674	0.739656
NC_002549.1	VP40	GCUUUGACUCAACUACGGC	GCCGUAGUUGAGUCAAAGC	320	0.739559
NC_002549.1	VP40	AAUUUCAUUUCAUCCAAAA	UUUUGGAUGAAAUGAAAUU	618	0.739325
NC_002549.1	VP40	UCUAACAUCUCCGGAGAAA	UUUCUCCGGAGAUGUUAGA	690	0.737589
NC_002549.1	VP40	CCUGAAUAUAUGGAGGCCA	UGGCCUCCAUAUAUUCAGG	31	0.737532
NC_002549.1	VP40	AGCAAUAAUGACUUCACUC	GAGUGAAGUCAUUAUUGCU	714	0.737525
NC_002549.1	VP40	UUCAUUUCAUCCAAAACUU	AAGUUUUGGAUGAAAUGAA	621	0.737428
NC_002549.1	VP40	CGAUCUAACAUCUCCGGAG	CUCCGGAGAUGUUAGAUCG	687	0.737109
NC_002549.1	VP40	GGACCCGGUGGCUCCAGGA	UCCUGGAGCCACCGGGUCC	885	0.736631
NC_002549.1	VP40	AUGACUUCACUCCAGGACU	AGUCCUGGAGUGAAGUCAU	721	0.735631
NC_002549.1	VP40	UGGACAACCAAUCAUCCCU	AGGGAUGAUUGGUUGUCCA	840	0.734605
NC_002549.1	VP40	GCUGACCGGUAAGAAGGUG	CACCUUCUUACCGGUCAGC	810	0.734342
NC_002549.1	VP40	AGGACUUUAAGAUCGUUCC	GGAACGAUCUUAAAGUCCU	734	0.734293
NC_002549.1	VP40	CGGGCCCCAAAGUGCUAAU	AUUAGCACUUUGGGGCCCG	248	0.734247
NC_002549.1	VP40	ACUUCUAAAAAUGGACAAC	GUUGUCCAUUUUUAGAAGU	829	0.732822
NC_002549.1	VP40	AUCCUUGAAGCUAUGGUGA	UCACCAUAGCUUCAAGGAU	220	0.731715
NC_002549.1	VP40	UGACCGGUAAGAAGGUGAC	GUCACCUUCUUACCGGUCA	812	0.731199
NC_002549.1	VP40	CAGUCAAUGGGGACACUCC	GGAGUGUCCCCAUUGACUG	122	0.730343
NC_002549.1	VP40	GGCCAUAUACCCUGUCAGG	CCUGACAGGGUAUAUGGCC	45	0.730052
NC_002549.1	VP40	UGCUAAUGAAGCAAAUUCC	GGAAUUUGCUUCAUUAGCA	260	0.728864
NC_002549.1	VP40	GCCGCCAUCAUGCUUGCUU	AAGCAAGCAUGAUGGCGGC	337	0.728813
NC_002549.1	VP40	AUUGAUCCAACCAAAAAUA	UAUUUUUGGUUGGAUCAAU	754	0.728342
NC_002549.1	VP40	CAAUUUGGCUUCCUCUAGG	CCUAGAGGAAGCCAAAUUG	278	0.727453
NC_002549.1	VP40	CCAGGAAUUUCAUUUCAUC	GAUGAAAUGAAAUUCCUGG	613	0.726882
NC_002549.1	VP40	UGUCGCUGAUCAAAAGACC	GGUCUUUUGAUCAGCGACA	297	0.726857
NC_002549.1	VP40	AUCCAAGCAAUAAUGACUU	AAGUCAUUAUUGCUUGGAU	709	0.726295
NC_002549.1	VP40	ACCAGGCUUUCCUCCAGGA	UCCUGGAGGAAAGCCUGGU	461	0.724578
NC_002549.1	VP40	GCCAGUCCAACUACCCCAG	CUGGGGUAGUUGGACUGGC	492	0.723804
NC_002549.1	VP40	CAACCAAUCAUCCCUGUUC	GAACAGGGAUGAUUGGUUG	844	0.721519
NC_002549.1	VP40	AUCUAACAUCUCCGGAGAA	UUCUCCGGAGAUGUUAGAU	689	0.719416
NC_002549.1	VP40	AUCAUGCUUGCUUCAUACA	UGUAUGAAGCAAGCAUGAU	343	0.719365
NC_002549.1	VP40	UGGAGGCCAUAUACCCUGU	ACAGGGUAUAUGGCCUCCA	41	0.719112
NC_002549.1	VP40	UGACACGUGUCAUUCUCCU	AGGAGAAUGACACGUGUCA	933	0.715471
NC_002549.1	VP40	CAACAAUUGCUAGAGGUGG	CCACCUCUAGCAAUUGUUG	71	0.715170
NC_002549.1	VP40	GACAGCACUCAAACUGAUC	GAUCAGUUUGAGUGCUGUC	528	0.715019
NC_002549.1	VP40	UUGCGUCCAGGAAUUUCAU	AUGAAAUUCCUGGACGCAA	607	0.714344
NC_002549.1	VP40	CGUGUCAUUCUCCUGCAAG	CUUGCAGGAGAAUGACACG	938	0.713139
NC_002549.1	VP40	UUUGAUUUGACAGCACUCA	UGAGUGCUGUCAAAUCAAA	520	0.713027
NC_002549.1	VP40	ACCACUGCCUGCUGCAACA	UGUUGCAGCAGGCAGUGGU	552	0.712321
NC_002549.1	VP40	AAAAUCCAAGCAAUAAUGA	UCAUUAUUGCUUGGAUUUU	706	0.712137
NC_002549.1	VP40	CUUCCUCUAGGUGUCGCUG	CAGCGACACCUAGAGGAAG	286	0.711821
NC_002549.1	VP40	GAAGAAGGGGAACAGUGCC	GGCACUGUUCCCCUUCUUC	669	0.711601
NC_002549.1	VP40	GCCAUAUACCCUGUCAGGU	ACCUGACAGGGUAUAUGGC	46	0.711424
NC_002549.1	VP40	AUCGUUCCAAUUGAUCCAA	UUGGAUCAAUUGGAACGAU	745	0.710882
NC_002549.1	VP40	AGUCAGUCAAUGGGGACAC	GUGUCCCCAUUGACUGACU	119	0.708468
NC_002549.1	VP40	GCCAGAAACUCUGGUCCAC	GUGGACCAGAGUUUCUGGC	789	0.707172
NC_002549.1	VP40	UUUCGGCAAGGCAACCAAU	AUUGGUUGCCUUGCCGAAA	372	0.705921
NC_002549.1	VP40	AACAAAAGUGGGAAGAAGG	CCUUCUUCCCACUUUUGUU	658	0.704877
NC_002549.1	VP40	GGACAACCAAUCAUCCCUG	CAGGGAUGAUUGGUUGUCC	841	0.703050
NC_002549.1	VP40	GGAGUCAGUCAAUGGGGAC	GUCCCCAUUGACUGACUCC	117	0.702044
NC_002549.1	VP40	UUCACUCCAGGACUUUAAG	CUUAAAGUCCUGGAGUGAA	726	0.701196
NC_002549.1	VP40	ACUAUCACCCAUUUCGGCA	UGCCGAAAUGGGUGAUAGU	361	0.699432
NC_002549.1	VP40	CCAGGAGACCUCACCAUGG	CCAUGGUGAGGUCUCCUGG	898	0.699253
NC_002549.1	VP40	UCCGGAGAAAAUCCAAGCA	UGCUUGGAUUUUCUCCGGA	699	0.698574
NC_002549.1	VP40	CCGCCAUCAUGCUUGCUUC	GAAGCAAGCAUGAUGGCGG	338	0.697685
NC_002549.1	VP40	GGAGUUCGUUCUUCCGCCA	UGGCGGAAGAACGAACUCC	477	0.696142
NC_002549.1	VP40	UCCAACUACCCCAGUAUUU	AAAUACUGGGGUAGUUGGA	497	0.695792
NC_002549.1	VP40	CUCAAACUGAUCACCCAAC	GUUGGGUGAUCAGUUUGAG	535	0.695114
NC_002549.1	VP40	ACAAAAGUGGGAAGAAGGG	CCCUUCUUCCCACUUUUGU	659	0.694559
NC_002549.1	VP40	UCCAACAGGAUCAAAUGGA	UCCAUUUGAUCCUGUUGGA	585	0.693066
NC_002549.1	VP40	ACCUUUGAUUUGACAGCAC	GUGCUGUCAAAUCAAAGGU	517	0.692707
NC_002549.1	VP40	AAUUUGGCUUCCUCUAGGU	ACCUAGAGGAAGCCAAAUU	279	0.692532
NC_002549.1	VP40	AAUGGAGCGUUGCGUCCAG	CUGGACGCAACGCUCCAUU	598	0.692227
NC_002549.1	VP40	UCCAAGCAAUAAUGACUUC	GAAGUCAUUAUUGCUUGGA	710	0.692073
NC_002549.1	VP40	GGCUUUCCUCCAGGAGUUC	GAACUCCUGGAGGAAAGCC	465	0.691623
NC_002549.1	VP40	CUUUGACUCAACUACGGCC	GGCCGUAGUUGAGUCAAAG	321	0.691269
NC_002549.1	VP40	AAAUGGACAACCAAUCAUC	GAUGAUUGGUUGUCCAUUU	837	0.689652
NC_002549.1	VP40	UUCCAAUUUGGCUUCCUCU	AGAGGAAGCCAAAUUGGAA	275	0.688717
NC_002549.1	VP40	AAAUGGAGCGUUGCGUCCA	UGGACGCAACGCUCCAUUU	597	0.687510
NC_002549.1	VP40	CCUCCUGAAUAUAUGGAGG	CCUCCAUAUAUUCAGGAGG	28	0.687339
NC_002549.1	VP40	CCACUGCCUGCUGCAACAU	AUGUUGCAGCAGGCAGUGG	553	0.687129
NC_002549.1	VP40	AUCGGGCCCCAAAGUGCUA	UAGCACUUUGGGGCCCGAU	246	0.686565
NC_002549.1	VP40	CCAACUACCCCAGUAUUUC	GAAAUACUGGGGUAGUUGG	498	0.686412
NC_002549.1	VP40	CAGGCUUUCCUCCAGGAGU	ACUCCUGGAGGAAAGCCUG	463	0.685883
NC_002549.1	VP40	CAUUGGGUUGGACCCGGUG	CACCGGGUCCAACCCAAUG	876	0.685183
NC_002549.1	VP40	UGGAGCGUUGCGUCCAGGA	UCCUGGACGCAACGCUCCA	600	0.685017
NC_002549.1	VP40	AAGUGGGAAGAAGGGGAAC	GUUCCCCUUCUUCCCACUU	663	0.684658
NC_002549.1	VP40	CAACAGGAUCAAAUGGAGC	GCUCCAUUUGAUCCUGUUG	587	0.683765
NC_002549.1	VP40	AGAUCGUUCCAAUUGAUCC	GGAUCAAUUGGAACGAUCU	743	0.681376
NC_002549.1	VP40	UGGGAAGAAGGGGAACAGU	ACUGUUCCCCUUCUUCCCA	666	0.681251
NC_002549.1	VP40	CAGGAAUUUCAUUUCAUCC	GGAUGAAAUGAAAUUCCUG	614	0.680318
NC_002549.1	VP40	UCUUCCGCCAGUCCAACUA	UAGUUGGACUGGCGGAAGA	486	0.679297
NC_002549.1	VP40	AAUGGGGACACUCCAUCGA	UCGAUGGAGUGUCCCCAUU	127	0.675265
NC_002549.1	VP40	UGGGGACACUCCAUCGAAU	AUUCGAUGGAGUGUCCCCA	129	0.674086
NC_002549.1	VP40	ACAGGAUCAAAUGGAGCGU	ACGCUCCAUUUGAUCCUGU	589	0.673584
NC_002549.1	VP40	UGCGUCCAGGAAUUUCAUU	AAUGAAAUUCCUGGACGCA	608	0.673567
NC_002549.1	VP40	AAUUGCUAGAGGUGGCAAC	GUUGCCACCUCUAGCAAUU	75	0.673328
NC_002549.1	VP40	UCAUCCUUGAAGCUAUGGU	ACCAUAGCUUCAAGGAUGA	218	0.672417
NC_002549.1	VP40	AUUCCAAUUUGGCUUCCUC	GAGGAAGCCAAAUUGGAAU	274	0.672395
NC_002549.1	VP40	AUGGGGACACUCCAUCGAA	UUCGAUGGAGUGUCCCCAU	128	0.672007
NC_002549.1	VP40	UUCUCCUGCAAGUCUUCCA	UGGAAGACUUGCAGGAGAA	945	0.670232
NC_002549.1	VP40	CAUUUCGGCAAGGCAACCA	UGGUUGCCUUGCCGAAAUG	370	0.669383
NC_002549.1	VP40	CAUCCAAAACUUCGCCCCA	UGGGGCGAAGUUUUGGAUG	628	0.666440
NC_002549.1	VP40	UUGAAGCUAUGGUGAAUGU	ACAUUCACCAUAGCUUCAA	224	0.666247
NC_002549.1	VP40	ACUGAUCACCCAACCACUG	CAGUGGUUGGGUGAUCAGU	540	0.665893
NC_002549.1	VP40	CCUCUAGGUGUCGCUGAUC	GAUCAGCGACACCUAGAGG	289	0.665735
NC_002549.1	VP40	CAUUCUCCUGCAAGUCUUC	GAAGACUUGCAGGAGAAUG	943	0.665685
NC_002549.1	VP40	CUACGGCCGCCAUCAUGCU	AGCAUGAUGGCGGCCGUAG	332	0.664871
NC_002549.1	VP40	AAAUCCAAGCAAUAAUGAC	GUCAUUAUUGCUUGGAUUU	707	0.664352
NC_002549.1	VP40	CAAAACUUCGCCCCAUUCU	AGAAUGGGGCGAAGUUUUG	632	0.664044
NC_002549.1	VP40	CCCAAAGUGCUAAUGAAGC	GCUUCAUUAGCACUUUGGG	253	0.663247
NC_002549.1	VP40	AGUGCCAGAAACUCUGGUC	GACCAGAGUUUCUGGCACU	786	0.662400
NC_002549.1	VP40	CCGCCAGUCCAACUACCCC	GGGGUAGUUGGACUGGCGG	490	0.661531
NC_002549.1	VP40	AAAGACCUACAGCUUUGAC	GUCAAAGCUGUAGGUCUUU	309	0.660813
NC_002549.1	VP40	UAUGGAGGCCAUAUACCCU	AGGGUAUAUGGCCUCCAUA	39	0.659674
NC_002549.1	VP40	ACCAAAAAUAUCAUGGGAA	UUCCCAUGAUAUUUUUGGU	763	0.658764
NC_002549.1	VP40	GGCAAGGCAACCAAUCCAC	GUGGAUUGGUUGCCUUGCC	376	0.657894
NC_002549.1	VP40	GGCUUCCUCUAGGUGUCGC	GCGACACCUAGAGGAAGCC	284	0.656035
NC_002549.1	VP40	ACCGGAGUCAGUCAAUGGG	CCCAUUGACUGACUCCGGU	114	0.655647
NC_002549.1	VP40	UUCCUCUAGGUGUCGCUGA	UCAGCGACACCUAGAGGAA	287	0.653938
NC_002549.1	VP40	GCCGAUCUAACAUCUCCGG	CCGGAGAUGUUAGAUCGGC	685	0.653535
NC_002549.1	VP40	UACGGCCGCCAUCAUGCUU	AAGCAUGAUGGCGGCCGUA	333	0.653367
NC_002549.1	VP40	UGAUCAAAAGACCUACAGC	GCUGUAGGUCUUUUGAUCA	303	0.652826
NC_002549.1	VP40	UCUCCGGAGAAAAUCCAAG	CUUGGAUUUUCUCCGGAGA	697	0.652533
NC_002549.1	VP40	UUGAUCCAACCAAAAAUAU	AUAUUUUUGGUUGGAUCAA	755	0.652301
NC_002549.1	VP40	AAAACUUCGCCCCAUUCUU	AAGAAUGGGGCGAAGUUUU	633	0.651386
NC_002549.1	VP40	CAAAUUCCAAUUUGGCUUC	GAAGCCAAAUUGGAAUUUG	271	0.648478
NC_002549.1	VP40	ACACACCAGGCAGUGUGUC	GACACACUGCCUGGUGUGU	191	0.647939
NC_002549.1	VP40	CCAGUCCAACUACCCCAGU	ACUGGGGUAGUUGGACUGG	493	0.647877
NC_002549.1	VP40	AUAUAUGGAGGCCAUAUAC	GUAUAUGGCCUCCAUAUAU	36	0.647593
NC_002549.1	VP40	CGUUCCAAUUGAUCCAACC	GGUUGGAUCAAUUGGAACG	747	0.647288
NC_002549.1	VP40	AUAAUGACUUCACUCCAGG	CCUGGAGUGAAGUCAUUAU	718	0.646779
NC_002549.1	VP40	UCCUCCUGAAUAUAUGGAG	CUCCAUAUAUUCAGGAGGA	27	0.646740
NC_002549.1	VP40	AACCAAAAAUAUCAUGGGA	UCCCAUGAUAUUUUUGGUU	762	0.645712
NC_002549.1	VP40	GAUCACCCAACCACUGCCU	AGGCAGUGGUUGGGUGAUC	543	0.643360
NC_002549.1	VP40	CGGCCGCCAUCAUGCUUGC	GCAAGCAUGAUGGCGGCCG	335	0.643157
NC_002549.1	VP40	CAAAUGGAGCGUUGCGUCC	GGACGCAACGCUCCAUUUG	596	0.643095
NC_002549.1	VP40	CAAAAGUGGGAAGAAGGGG	CCCCUUCUUCCCACUUUUG	660	0.641732
NC_002549.1	VP40	CAUUUCAUCCAAAACUUCG	CGAAGUUUUGGAUGAAAUG	623	0.641706
NC_002549.1	VP40	GUAUUUCACCUUUGAUUUG	CAAAUCAAAGGUGAAAUAC	510	0.639854
NC_002549.1	VP40	UCAACUACGGCCGCCAUCA	UGAUGGCGGCCGUAGUUGA	328	0.639829
NC_002549.1	VP40	CUUUCCUCCAGGAGUUCGU	ACGAACUCCUGGAGGAAAG	467	0.637592
NC_002549.1	VP40	AAUCGGCUGGGUCCUGGAA	UUCCAGGACCCAGCCGAUU	406	0.637392
NC_002549.1	VP40	UAUUUCACCUUUGAUUUGA	UCAAAUCAAAGGUGAAAUA	511	0.637057
NC_002549.1	VP40	CACUGCCUGCUGCAACAUG	CAUGUUGCAGCAGGCAGUG	554	0.636632
NC_002549.1	VP40	GGCCGCCAUCAUGCUUGCU	AGCAAGCAUGAUGGCGGCC	336	0.635088
NC_002549.1	VP40	CCAACCACUGCCUGCUGCA	UGCAGCAGGCAGUGGUUGG	549	0.635022
NC_002549.1	VP40	CUUCUAAAAAUGGACAACC	GGUUGUCCAUUUUUAGAAG	830	0.634657
NC_002549.1	VP40	UCGUUCUUCCGCCAGUCCA	UGGACUGGCGGAAGAACGA	482	0.631275
NC_002549.1	VP40	CUUCCGCCAGUCCAACUAC	GUAGUUGGACUGGCGGAAG	487	0.630253
NC_002549.1	VP40	UCCUCCAGGAGUUCGUUCU	AGAACGAACUCCUGGAGGA	470	0.629900
NC_002549.1	VP40	UCGGGCCCCAAAGUGCUAA	UUAGCACUUUGGGGCCCGA	247	0.628270
NC_002549.1	VP40	UGAAGCUAUGGUGAAUGUC	GACAUUCACCAUAGCUUCA	225	0.627914
NC_002549.1	VP40	GUGGGAAGAAGGGGAACAG	CUGUUCCCCUUCUUCCCAC	665	0.627331
NC_002549.1	VP40	CCCAUUUCGGCAAGGCAAC	GUUGCCUUGCCGAAAUGGG	368	0.626841
NC_002549.1	VP40	CCCGGUGGCUCCAGGAGAC	GUCUCCUGGAGCCACCGGG	888	0.626501
NC_002549.1	VP40	AUUUGGCUUCCUCUAGGUG	CACCUAGAGGAAGCCAAAU	280	0.625403
NC_002549.1	VP40	AAUUCCAAUUUGGCUUCCU	AGGAAGCCAAAUUGGAAUU	273	0.625039
NC_002549.1	VP40	ACUGCCUGCUGCAACAUGG	CCAUGUUGCAGCAGGCAGU	555	0.624689
NC_002549.1	VP40	AAACUGAUCACCCAACCAC	GUGGUUGGGUGAUCAGUUU	538	0.624547
NC_002549.1	VP40	CCAGGCUUUCCUCCAGGAG	CUCCUGGAGGAAAGCCUGG	462	0.623925
NC_002549.1	VP40	GAUCAAAUGGAGCGUUGCG	CGCAACGCUCCAUUUGAUC	593	0.623535
NC_002549.1	VP40	UCCAAAACUUCGCCCCAUU	AAUGGGGCGAAGUUUUGGA	630	0.623182
NC_002549.1	VP40	GCACUCAAACUGAUCACCC	GGGUGAUCAGUUUGAGUGC	532	0.622730
NC_002549.1	VP40	UUUCAUUUCAUCCAAAACU	AGUUUUGGAUGAAAUGAAA	620	0.621644
NC_002549.1	VP40	UCAUUUCAUCCAAAACUUC	GAAGUUUUGGAUGAAAUGA	622	0.613031
NC_002549.1	VP40	AAGUGCCAGAAACUCUGGU	ACCAGAGUUUCUGGCACUU	785	0.611200
NC_002549.1	VP40	UCUCCUGCAAGUCUUCCAG	CUGGAAGACUUGCAGGAGA	946	0.610661
NC_002549.1	VP40	UAAAAAUGGACAACCAAUC	GAUUGGUUGUCCAUUUUUA	834	0.610150
NC_002549.1	VP40	CCGGAGUCAGUCAAUGGGG	CCCCAUUGACUGACUCCGG	115	0.609058
NC_002549.1	VP40	AAUGACUUCACUCCAGGAC	GUCCUGGAGUGAAGUCAUU	720	0.609043
NC_002549.1	VP40	GUGCCAGAAACUCUGGUCC	GGACCAGAGUUUCUGGCAC	787	0.608900
NC_002549.1	VP40	AACAAUUGCUAGAGGUGGC	GCCACCUCUAGCAAUUGUU	72	0.607800
NC_002549.1	VP40	UCAUGCUUGCUUCAUACAC	GUGUAUGAAGCAAGCAUGA	344	0.607210
NC_002549.1	VP40	GGUGAAUGUCAUAUCGGGC	GCCCGAUAUGACAUUCACC	234	0.606471
NC_002549.1	VP40	UUUCACCUUUGAUUUGACA	UGUCAAAUCAAAGGUGAAA	513	0.603914
NC_002549.1	VP40	GCUUUCCUCCAGGAGUUCG	CGAACUCCUGGAGGAAAGC	466	0.603858
NC_002549.1	VP40	AACUACCCCAGUAUUUCAC	GUGAAAUACUGGGGUAGUU	500	0.602372
NC_002549.1	VP40	UUGGCUUCCUCUAGGUGUC	GACACCUAGAGGAAGCCAA	282	0.601781
NC_002549.1	VP40	CAAUGGGGACACUCCAUCG	CGAUGGAGUGUCCCCAUUG	126	0.600995
NC_002549.1	VP40	GUCAAUCGGCUGGGUCCUG	CAGGACCCAGCCGAUUGAC	403	0.600712
NC_002549.1	VP40	UUUGACAGCACUCAAACUG	CAGUUUGAGUGCUGUCAAA	525	0.600250
NC_002549.1	VP40	UUUGGCUUCCUCUAGGUGU	ACACCUAGAGGAAGCCAAA	281	0.596890
NC_002549.1	VP40	GGAGGCCAUAUACCCUGUC	GACAGGGUAUAUGGCCUCC	42	0.596106
NC_002549.1	VP40	UGCCUGCUGCAACAUGGAC	GUCCAUGUUGCAGCAGGCA	557	0.595835
NC_002549.1	VP40	AAACCAGGCUUUCCUCCAG	CUGGAGGAAAGCCUGGUUU	459	0.591947
NC_002549.1	VP40	CCAAAACUUCGCCCCAUUC	GAAUGGGGCGAAGUUUUGG	631	0.590328
NC_002549.1	VP40	GCCUGCUGCAACAUGGACC	GGUCCAUGUUGCAGCAGGC	558	0.590111
NC_002549.1	VP40	AGCACUCAAACUGAUCACC	GGUGAUCAGUUUGAGUGCU	531	0.589670
NC_002549.1	VP40	CUGAUCACCCAACCACUGC	GCAGUGGUUGGGUGAUCAG	541	0.589607
NC_002549.1	VP40	UGUCAUUCUCCUGCAAGUC	GACUUGCAGGAGAAUGACA	940	0.588667
NC_002549.1	VP40	ACAUCUCCGGAGAAAAUCC	GGAUUUUCUCCGGAGAUGU	694	0.585236
NC_002549.1	VP40	CUCCGGAGAAAAUCCAAGC	GCUUGGAUUUUCUCCGGAG	698	0.584905
NC_002549.1	VP40	CUUGAAGCUAUGGUGAAUG	CAUUCACCAUAGCUUCAAG	223	0.583854
NC_002549.1	VP40	CGGCUGGGUCCUGGAAUCC	GGAUUCCAGGACCCAGCCG	409	0.583539
NC_002549.1	VP40	AGUUCGUUCUUCCGCCAGU	ACUGGCGGAAGAACGAACU	479	0.582825
NC_002549.1	VP40	GGGCCCCAAAGUGCUAAUG	CAUUAGCACUUUGGGGCCC	249	0.582248
NC_002549.1	VP40	UGCCGAUCUAACAUCUCCG	CGGAGAUGUUAGAUCGGCA	684	0.581617
NC_002549.1	VP40	GGGGACACUCCAUCGAAUC	GAUUCGAUGGAGUGUCCCC	130	0.581321
NC_002549.1	VP40	AAGGGGAACAGUGCCGAUC	GAUCGGCACUGUUCCCCUU	673	0.575038
NC_002549.1	VP40	UAUCGGGCCCCAAAGUGCU	AGCACUUUGGGGCCCGAUA	245	0.574122
NC_002549.1	VP40	UAUGGUGAAUGUCAUAUCG	CGAUAUGACAUUCACCAUA	231	0.573910
NC_002549.1	VP40	CCAGGAGUUCGUUCUUCCG	CGGAAGAACGAACUCCUGG	474	0.571692
NC_002549.1	VP40	UUUCCUCCAGGAGUUCGUU	AACGAACUCCUGGAGGAAA	468	0.570943
NC_002549.1	VP40	ACCCAACCACUGCCUGCUG	CAGCAGGCAGUGGUUGGGU	547	0.570732
NC_002549.1	VP40	AUGGAGGCCAUAUACCCUG	CAGGGUAUAUGGCCUCCAU	40	0.568200
NC_002549.1	VP40	UCAAACUGAUCACCCAACC	GGUUGGGUGAUCAGUUUGA	536	0.567831
NC_002549.1	VP40	AAGAAGGGGAACAGUGCCG	CGGCACUGUUCCCCUUCUU	670	0.565253
NC_002549.1	VP40	AAGAUCGUUCCAAUUGAUC	GAUCAAUUGGAACGAUCUU	742	0.561362
NC_002549.1	VP40	UCGGCAAGGCAACCAAUCC	GGAUUGGUUGCCUUGCCGA	374	0.557063
NC_002549.1	VP40	UCGUUCCAAUUGAUCCAAC	GUUGGAUCAAUUGGAACGA	746	0.556635
NC_002549.1	VP40	AACUACGGCCGCCAUCAUG	CAUGAUGGCGGCCGUAGUU	330	0.555646
NC_002549.1	VP40	UUCACCUUUGAUUUGACAG	CUGUCAAAUCAAAGGUGAA	514	0.555255
NC_002549.1	VP40	UCAAAUGGAGCGUUGCGUC	GACGCAACGCUCCAUUUGA	595	0.554987
NC_002549.1	VP40	CUCAACUACGGCCGCCAUC	GAUGGCGGCCGUAGUUGAG	327	0.553253
NC_002549.1	VP40	CCGGUGGCUCCAGGAGACC	GGUCUCCUGGAGCCACCGG	889	0.550900
NC_002549.1	VP40	AUUUCACCUUUGAUUUGAC	GUCAAAUCAAAGGUGAAAU	512	0.550100
NC_002549.1	VP40	CCAUUUCGGCAAGGCAACC	GGUUGCCUUGCCGAAAUGG	369	0.549191
NC_002549.1	VP40	UAUCACCCAUUUCGGCAAG	CUUGCCGAAAUGGGUGAUA	363	0.548040
NC_002549.1	VP40	CAACCAAAAAUAUCAUGGG	CCCAUGAUAUUUUUGGUUG	761	0.545150
NC_002549.1	VP40	ACUACCCCAGUAUUUCACC	GGUGAAAUACUGGGGUAGU	501	0.544984
NC_002549.1	VP40	ACGGCCGCCAUCAUGCUUG	CAAGCAUGAUGGCGGCCGU	334	0.543992
NC_002549.1	VP40	CCAACCAAAAAUAUCAUGG	CCAUGAUAUUUUUGGUUGG	760	0.543844
NC_002549.1	VP40	GAGUUCGUUCUUCCGCCAG	CUGGCGGAAGAACGAACUC	478	0.543111
NC_002549.1	VP40	AUAUGGAGGCCAUAUACCC	GGGUAUAUGGCCUCCAUAU	38	0.541944
NC_002549.1	VP40	CUCCAGGAGUUCGUUCUUC	GAAGAACGAACUCCUGGAG	472	0.541770
NC_002549.1	VP40	UCCAGGAGUUCGUUCUUCC	GGAAGAACGAACUCCUGGA	473	0.537453
NC_002549.1	VP40	AAUGGACAACCAAUCAUCC	GGAUGAUUGGUUGUCCAUU	838	0.537117
NC_002549.1	VP40	AUCAAAUGGAGCGUUGCGU	ACGCAACGCUCCAUUUGAU	594	0.537070
NC_002549.1	VP40	AUACAGGCUUCCUGACACC	GGUGUCAGGAAGCCUGUAU	98	0.537047
NC_002549.1	VP40	GUUCUUCCGCCAGUCCAAC	GUUGGACUGGCGGAAGAAC	484	0.536385
NC_002549.1	VP40	AUUUCAUUUCAUCCAAAAC	GUUUUGGAUGAAAUGAAAU	619	0.535331
NC_002549.1	VP40	AUGGUGAAUGUCAUAUCGG	CCGAUAUGACAUUCACCAU	232	0.532922
NC_002549.1	VP40	AUCCAAAACUUCGCCCCAU	AUGGGGCGAAGUUUUGGAU	629	0.532707
NC_002549.1	VP40	AAGCAAAUUCCAAUUUGGC	GCCAAAUUGGAAUUUGCUU	268	0.530420
NC_002549.1	VP40	ACACGUGUCAUUCUCCUGC	GCAGGAGAAUGACACGUGU	935	0.528346
NC_002549.1	VP40	UGAUCACCCAACCACUGCC	GGCAGUGGUUGGGUGAUCA	542	0.526073
NC_002549.1	VP40	CACCCAACCACUGCCUGCU	AGCAGGCAGUGGUUGGGUG	546	0.525542
NC_002549.1	VP40	UCCUGAAUAUAUGGAGGCC	GGCCUCCAUAUAUUCAGGA	30	0.524157
NC_002549.1	VP40	UUUAAGAUCGUUCCAAUUG	CAAUUGGAACGAUCUUAAA	739	0.519298
NC_002549.1	VP40	CUCCUGAAUAUAUGGAGGC	GCCUCCAUAUAUUCAGGAG	29	0.518878
NC_002549.1	VP40	AACAGGAUCAAAUGGAGCG	CGCUCCAUUUGAUCCUGUU	588	0.512682
NC_002549.1	VP40	UCAUAUCGGGCCCCAAAGU	ACUUUGGGGCCCGAUAUGA	242	0.510432
NC_002549.1	VP40	UUGACUCAACUACGGCCGC	GCGGCCGUAGUUGAGUCAA	323	0.509632
NC_002549.1	VP40	UUUGACUCAACUACGGCCG	CGGCCGUAGUUGAGUCAAA	322	0.509445
NC_002549.1	VP40	UCACCUUUGAUUUGACAGC	GCUGUCAAAUCAAAGGUGA	515	0.509227
NC_002549.1	VP40	UGGCUUCCUCUAGGUGUCG	CGACACCUAGAGGAAGCCA	283	0.507243
NC_002549.1	VP40	ACUACGGCCGCCAUCAUGC	GCAUGAUGGCGGCCGUAGU	331	0.506880
NC_002549.1	VP40	UCGGCUGGGUCCUGGAAUC	GAUUCCAGGACCCAGCCGA	408	0.504880
NC_002549.1	VP40	CUCCUGCAAGUCUUCCAGC	GCUGGAAGACUUGCAGGAG	947	0.501264
NC_002549.1	VP40	UUCUUCCGCCAGUCCAACU	AGUUGGACUGGCGGAAGAA	485	0.498982
NC_002549.1	VP40	UGGACCCGGUGGCUCCAGG	CCUGGAGCCACCGGGUCCA	884	0.483864
NC_002549.1	VP40	AUGGACAACCAAUCAUCCC	GGGAUGAUUGGUUGUCCAU	839	0.482869
NC_002549.1	VP40	CCCAACCACUGCCUGCUGC	GCAGCAGGCAGUGGUUGGG	548	0.482657
NC_002549.1	VP40	AACAUCUCCGGAGAAAAUC	GAUUUUCUCCGGAGAUGUU	693	0.482464
NC_002549.1	VP40	AUCACCCAACCACUGCCUG	CAGGCAGUGGUUGGGUGAU	544	0.482406
NC_002549.1	VP40	CAUAUCGGGCCCCAAAGUG	CACUUUGGGGCCCGAUAUG	243	0.482115
NC_002549.1	VP40	UCGCCCCAUUCUUUUACCC	GGGUAAAAGAAUGGGGCGA	639	0.481442
NC_002549.1	VP40	UCAAUGGGGACACUCCAUC	GAUGGAGUGUCCCCAUUGA	125	0.478149
NC_002549.1	VP40	UGACUCAACUACGGCCGCC	GGCGGCCGUAGUUGAGUCA	324	0.476373
NC_002549.1	VP40	AACCAGGCUUUCCUCCAGG	CCUGGAGGAAAGCCUGGUU	460	0.475347
NC_002549.1	VP40	AUAUCGGGCCCCAAAGUGC	GCACUUUGGGGCCCGAUAU	244	0.474232
NC_002549.1	VP40	UCACCCAACCACUGCCUGC	GCAGGCAGUGGUUGGGUGA	545	0.474025
NC_002549.1	VP40	AUUUCAUCCAAAACUUCGC	GCGAAGUUUUGGAUGAAAU	624	0.473134
NC_002549.1	VP40	AUGGAGCGUUGCGUCCAGG	CCUGGACGCAACGCUCCAU	599	0.472449
NC_002549.1	VP40	AACCACUGCCUGCUGCAAC	GUUGCAGCAGGCAGUGGUU	551	0.471543
NC_002549.1	VP40	UUCGGCAAGGCAACCAAUC	GAUUGGUUGCCUUGCCGAA	373	0.470129
NC_002549.1	VP40	GUUCGUUCUUCCGCCAGUC	GACUGGCGGAAGAACGAAC	480	0.467636
NC_002549.1	VP40	AUCGGCUGGGUCCUGGAAU	AUUCCAGGACCCAGCCGAU	407	0.467183
NC_002549.1	VP40	UUCAUCCUUGAAGCUAUGG	CCAUAGCUUCAAGGAUGAA	217	0.463914
NC_002549.1	VP40	UCCGCCAGUCCAACUACCC	GGGUAGUUGGACUGGCGGA	489	0.459619
NC_002549.1	VP40	UAUAUGGAGGCCAUAUACC	GGUAUAUGGCCUCCAUAUA	37	0.458525
NC_002549.1	VP40	UACAGGCUUCCUGACACCG	CGGUGUCAGGAAGCCUGUA	99	0.455144
NC_002549.1	VP40	AGGAGUUCGUUCUUCCGCC	GGCGGAAGAACGAACUCCU	476	0.454163
NC_002549.1	VP40	UUCCUCCAGGAGUUCGUUC	GAACGAACUCCUGGAGGAA	469	0.453593
NC_002549.1	VP40	UUCCGCCAGUCCAACUACC	GGUAGUUGGACUGGCGGAA	488	0.443319
NC_002549.1	VP40	UCAAUCGGCUGGGUCCUGG	CCAGGACCCAGCCGAUUGA	404	0.442641
NC_002549.1	VP40	AUUCUCCUGCAAGUCUUCC	GGAAGACUUGCAGGAGAAU	944	0.440738
NC_002549.1	VP40	CAGGAGUUCGUUCUUCCGC	GCGGAAGAACGAACUCCUG	475	0.433934
NC_002549.1	VP40	AAAUUCCAAUUUGGCUUCC	GGAAGCCAAAUUGGAAUUU	272	0.425470
NC_002549.1	VP40	AUCACCCAUUUCGGCAAGG	CCUUGCCGAAAUGGGUGAU	364	0.392947
NC_002549.1	VP40	UUCGCCCCAUUCUUUUACC	GGUAAAAGAAUGGGGCGAA	638	0.381350
NC_002549.1	VP40	UCAUCCAAAACUUCGCCCC	GGGGCGAAGUUUUGGAUGA	627	0.380518
NC_002549.1	VP40	UUUCAUCCAAAACUUCGCC	GGCGAAGUUUUGGAUGAAA	625	0.360017
NC_002549.1	VP40	UCACCCAUUUCGGCAAGGC	GCCUUGCCGAAAUGGGUGA	365	0.350859
NC_002549.1	VP40	UUCGUUCUUCCGCCAGUCC	GGACUGGCGGAAGAACGAA	481	0.331673
NC_002549.1	VP40	UUCAUCCAAAACUUCGCCC	GGGCGAAGUUUUGGAUGAA	626	0.301911

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