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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_002549.1VP35GGCUACUGUUGUGCAACAAUUGUUGCACAACAGUAGCC2791.114280
NC_002549.1VP35ACUGUUGUGCAACAACAAAUUUGUUGUUGCACAACAGU2831.111374
NC_002549.1VP35GAGGCAUUCAACAAUCUAAUUAGAUUGUUGAAUGCCUC5921.080354
NC_002549.1VP35CUACUGUUGUGCAACAACAUGUUGUUGCACAACAGUAG2811.052621
NC_002549.1VP35UACUGUUGUGCAACAACAAUUGUUGUUGCACAACAGUA2821.028626
NC_002549.1VP35CAAUGUGCCCUAAUUCAAAUUUGAAUUAGGGCACAUUG8201.027994
NC_002549.1VP35CCUAAUUCAAAUUACAAAAUUUUGUAAUUUGAAUUAGG8281.021839
NC_002549.1VP35GAAGACGCGCAACAGUCAAUUGACUGUUGCGCGUCUUC1981.018037
NC_002549.1VP35CCCUAAUUCAAAUUACAAAUUUGUAAUUUGAAUUAGGG8271.015229
NC_002549.1VP35GUGCUGAGAUGGUUGCAAAUUUGCAACCAUCUCAGCAC4041.008200
NC_002549.1VP35AGGCAUUCAACAAUCUAAAUUUAGAUUGUUGAAUGCCU5931.001219
NC_002549.1VP35AGUACAAGUGAUUUGUAAAUUUACAAAUCACUUGUACU7260.998887
NC_002549.1VP35GCUAAUGACCGGAAGAAUUAAUUCUUCCGGUCAUUAGC960.997569
NC_002549.1VP35GGAGGCAUUCAACAAUCUAUAGAUUGUUGAAUGCCUCC5910.992254
NC_002549.1VP35GAAGAAUUCCUGUAAGCGAUCGCUUACAGGAAUUCUUC1070.990081
NC_002549.1VP35CAUUGGCUACUGUUGUGCAUGCACAACAGUAGCCAAUG2750.989261
NC_002549.1VP35UCAAUGUGCCCUAAUUCAAUUGAAUUAGGGCACAUUGA8190.982240
NC_002549.1VP35CUCAAUGUGCCCUAAUUCAUGAAUUAGGGCACAUUGAG8180.980434
NC_002549.1VP35GGCUUCAUUGGCUACUGUUAACAGUAGCCAAUGAAGCC2700.978348
NC_002549.1VP35GCCCUAAUUCAAAUUACAAUUGUAAUUUGAAUUAGGGC8260.978136
NC_002549.1VP35CCAGGAUUAUGCUACGCAUAUGCGUAGCAUAAUCCUGG1510.975279
NC_002549.1VP35GCAGCUAAUGACCGGAAGAUCUUCCGGUCAUUAGCUGC930.975267
NC_002549.1VP35GCAAAGGAUUUGAGAAACAUGUUUCUCAAAUCCUUUGC6610.972802
NC_002549.1VP35GGAAAAGAUAGCAACUCAUAUGAGUUGCUAUCUUUUCC7480.970018
NC_002549.1VP35GUGUUAGGGAGGCAUUCAAUUGAAUGCCUCCCUAACAC5840.967670
NC_002549.1VP35CUGAGAUGGUUGCAAAAUAUAUUUUGCAACCAUCUCAG4070.967018
NC_002549.1VP35GCUACUGUUGUGCAACAACGUUGUUGCACAACAGUAGC2800.961009
NC_002549.1VP35GCGCAACAGUCAAACCCAAUUGGGUUUGACUGUUGCGC2040.959041
NC_002549.1VP35CGACAUCUUCUGUGAUAUUAAUAUCACAGAAGAUGUCG1230.956011
NC_002549.1VP35GACCGGAAGAAUUCCUGUAUACAGGAAUUCUUCCGGUC1020.955506
NC_002549.1VP35GGGAAAAGAUAGCAACUCAUGAGUUGCUAUCUUUUCCC7470.953868
NC_002549.1VP35CCAAAUGCAACAAACGAAGCUUCGUUUGUUGCAUUUGG1710.947514
NC_002549.1VP35GUUGUGCAACAACAAACCAUGGUUUGUUGUUGCACAAC2860.945739
NC_002549.1VP35CGAAGACGCGCAACAGUCAUGACUGUUGCGCGUCUUCG1970.945262
NC_002549.1VP35GAAGGAGACUCUCCUCAAUAUUGAGGAGAGUCUCCUUC8050.943806
NC_002549.1VP35CCCAAAUGCAACAAACGAAUUCGUUUGUUGCAUUUGGG1700.941196
NC_002549.1VP35AUUGGCUACUGUUGUGCAAUUGCACAACAGUAGCCAAU2760.939429
NC_002549.1VP35UGAGAUGGUUGCAAAAUAUAUAUUUUGCAACCAUCUCA4080.938553
NC_002549.1VP35UAGUACAAGUGAUUUGUAAUUACAAAUCACUUGUACUA7250.938269
NC_002549.1VP35CACCAAUUAGUACAAGUGAUCACUUGUACUAAUUGGUG7180.937635
NC_002549.1VP35UGCUGAGAUGGUUGCAAAAUUUUGCAACCAUCUCAGCA4050.933695
NC_002549.1VP35CUAAUUCAAAUUACAAAAAUUUUUGUAAUUUGAAUUAG8290.932904
NC_002549.1VP35CUGCGGCCACGACUCAAAAUUUUGAGUCGUGGCCGCAG320.932174
NC_002549.1VP35CAAAGGAUUUGAGAAACAUAUGUUUCUCAAAUCCUUUG6620.931960
NC_002549.1VP35CAAAAAGAGUUCCAAUCUUAAGAUUGGAACUCUUUUUG8420.931688
NC_002549.1VP35GCUGAGAUGGUUGCAAAAUAUUUUGCAACCAUCUCAGC4060.929445
NC_002549.1VP35CGGCAAAGGAUUUGAGAAAUUUCUCAAAUCCUUUGCCG6590.928545
NC_002549.1VP35UGGCUACUGUUGUGCAACAUGUUGCACAACAGUAGCCA2780.928444
NC_002549.1VP35GAAAAGAUAGCAACUCAUUAAUGAGUUGCUAUCUUUUC7490.927084
NC_002549.1VP35GACCGUCCCUCAAAGUGUUAACACUUUGAGGGACGGUC5700.926089
NC_002549.1VP35AGAAUUCCUGUAAGCGACAUGUCGCUUACAGGAAUUCU1090.924677
NC_002549.1VP35UGGUCUAAAGCCAGUUUAUAUAAACUGGCUUUAGACCA3480.923871
NC_002549.1VP35GCGACAUCUUCUGUGAUAUAUAUCACAGAAGAUGUCGC1220.922247
NC_002549.1VP35GAGCUUGCCAGAAAAGCUUAAGCUUUUCUGGCAAGCUC9140.921755
NC_002549.1VP35GUCUAAAGCCAGUUUAUGAUCAUAAACUGGCUUUAGAC3500.914340
NC_002549.1VP35CGAGCUUGCCAGAAAAGCUAGCUUUUCUGGCAAGCUCG9130.914087
NC_002549.1VP35GAUUCGGGGUAAGAUUGAAUUCAAUCUUACCCCGAAUC5400.912822
NC_002549.1VP35ACUGCGGCCACGACUCAAAUUUGAGUCGUGGCCGCAGU310.911687
NC_002549.1VP35GAGCAGCUAAUGACCGGAAUUCCGGUCAUUAGCUGCUC910.911013
NC_002549.1VP35GAAUCAUUAGAACAACGCAUGCGUUGUUCUAAUGAUUC3130.909756
NC_002549.1VP35ACCAAUUAGUACAAGUGAUAUCACUUGUACUAAUUGGU7190.904942
NC_002549.1VP35AGCUAAUGACCGGAAGAAUAUUCUUCCGGUCAUUAGCU950.904220
NC_002549.1VP35AGUGUUAGGGAGGCAUUCAUGAAUGCCUCCCUAACACU5830.903238
NC_002549.1VP35AGGAUUUGAGAAACAUUAUAUAAUGUUUCUCAAAUCCU6650.901149
NC_002549.1VP35GCUUCAUUGGCUACUGUUGCAACAGUAGCCAAUGAAGC2710.900359
NC_002549.1VP35CUGUUGUGCAACAACAAACGUUUGUUGUUGCACAACAG2840.900349
NC_002549.1VP35ACCGGAAGAAUUCCUGUAAUUACAGGAAUUCUUCCGGU1030.898734
NC_002549.1VP35CUACGCAUCCCAAAUGCAAUUGCAUUUGGGAUGCGUAG1620.897824
NC_002549.1VP35GAUGCUGCUCCACCUGUCAUGACAGGUGGAGCAGCAUC8650.897251
NC_002549.1VP35AGCGACAUCUUCUGUGAUAUAUCACAGAAGAUGUCGCU1210.897128
NC_002549.1VP35AAGACGCGCAACAGUCAAAUUUGACUGUUGCGCGUCUU1990.896823
NC_002549.1VP35GAUAGCAACUCAUUGGACAUGUCCAAUGAGUUGCUAUC7540.895730
NC_002549.1VP35UGAAGGAGACUCUCCUCAAUUGAGGAGAGUCUCCUUCA8040.895431
NC_002549.1VP35CUGGAUCUCUGAGCAGCUAUAGCUGCUCAGAGAUCCAG810.893176
NC_002549.1VP35CCAGUUUAUGAUAUGGCAAUUGCCAUAUCAUAAACUGG3580.892573
NC_002549.1VP35GAUUAUGCUACGCAUCCCAUGGGAUGCGUAGCAUAAUC1550.891922
NC_002549.1VP35CUUCCAAGAUGCUGCUCCAUGGAGCAGCAUCUUGGAAG8580.891537
NC_002549.1VP35CAGCUAAUGACCGGAAGAAUUCUUCCGGUCAUUAGCUG940.891080
NC_002549.1VP35UGCCCUAAUUCAAAUUACAUGUAAUUUGAAUUAGGGCA8250.890460
NC_002549.1VP35GGAACUGCUUUCCACCAAUAUUGGUGGAAAGCAGUUCC7060.884858
NC_002549.1VP35CCCCGAGCUUGCCAGAAAAUUUUCUGGCAAGCUCGGGG9100.884739
NC_002549.1VP35CCAAUUAGUACAAGUGAUUAAUCACUUGUACUAAUUGG7200.883936
NC_002549.1VP35UGCAACAAACGAAGCCAAAUUUGGCUUCGUUUGUUGCA1760.881377
NC_002549.1VP35UCUCCUCAAUGUGCCCUAAUUAGGGCACAUUGAGGAGA8140.881258
NC_002549.1VP35CAAUCUAAACAGUACCACUAGUGGUACUGUUUAGAUUG6030.881069
NC_002549.1VP35AGGAGACUCUCCUCAAUGUACAUUGAGGAGAGUCUCCU8070.880352
NC_002549.1VP35GCCAGUUUAUGAUAUGGCAUGCCAUAUCAUAAACUGGC3570.880150
NC_002549.1VP35CCUGUAAGCGACAUCUUCUAGAAGAUGUCGCUUACAGG1150.878486
NC_002549.1VP35CAGUUUAUGAUAUGGCAAAUUUGCCAUAUCAUAAACUG3590.878132
NC_002549.1VP35GACAUUUCGGCAAAGGAUUAAUCCUUUGCCGAAAUGUC6520.877093
NC_002549.1VP35GAAUGGUCUAAAGCCAGUUAACUGGCUUUAGACCAUUC3450.876699
NC_002549.1VP35AUGCAACAAACGAAGCCAAUUGGCUUCGUUUGUUGCAU1750.876535
NC_002549.1VP35GAGUUCCAAUCUUCCAAGAUCUUGGAAGAUUGGAACUC8480.875950
NC_002549.1VP35AAUUCAAAUUACAAAAAGAUCUUUUUGUAAUUUGAAUU8310.875843
NC_002549.1VP35CGCAACAGUCAAACCCAAAUUUGGGUUUGACUGUUGCG2050.873202
NC_002549.1VP35UGAGAAUGGUCUAAAGCCAUGGCUUUAGACCAUUCUCA3420.872124
NC_002549.1VP35GAGAAUGGUCUAAAGCCAGCUGGCUUUAGACCAUUCUC3430.871742
NC_002549.1VP35GGGAGGCAUUCAACAAUCUAGAUUGUUGAAUGCCUCCC5900.871533
NC_002549.1VP35CCAUCGCAUCAGAAUCAUUAAUGAUUCUGAUGCGAUGG3020.869196
NC_002549.1VP35CGGACCCAAUUUGCAAUCAUGAUUGCAAAUUGGGUCCG2240.868398
NC_002549.1VP35UAAGCGACAUCUUCUGUGAUCACAGAAGAUGUCGCUUA1190.867799
NC_002549.1VP35ACCGUCCCUCAAAGUGUUAUAACACUUUGAGGGACGGU5710.867785
NC_002549.1VP35UCUGUGAUAUUGAGAACAAUUGUUCUCAAUAUCACAGA1310.865987
NC_002549.1VP35CAAUUAGUACAAGUGAUUUAAAUCACUUGUACUAAUUG7210.865579
NC_002549.1VP35CGAGGUUGGGUAUGUGUUUAAACACAUACCCAACCUCG9640.865493
NC_002549.1VP35CGAUUCGGGGUAAGAUUGAUCAAUCUUACCCCGAAUCG5390.861017
NC_002549.1VP35AGAAUGGUCUAAAGCCAGUACUGGCUUUAGACCAUUCU3440.858916
NC_002549.1VP35CCCUCAAAGUGUUAGGGAGCUCCCUAACACUUUGAGGG5760.857079
NC_002549.1VP35GGUUUGUGCUGAGAUGGUUAACCAUCUCAGCACAAACC3990.856449
NC_002549.1VP35CAAACGAAGCCAAACCCGAUCGGGUUUGGCUUCGUUUG1810.856109
NC_002549.1VP35CAAAGUGUUAGGGAGGCAUAUGCCUCCCUAACACUUUG5800.853526
NC_002549.1VP35CUGACAUUUCGGCAAAGGAUCCUUUGCCGAAAUGUCAG6500.852805
NC_002549.1VP35CAUCAGAAUCAUUAGAACAUGUUCUAAUGAUUCUGAUG3080.852336
NC_002549.1VP35UGUGCUGAGAUGGUUGCAAUUGCAACCAUCUCAGCACA4030.851546
NC_002549.1VP35CUUCAUUGGCUACUGUUGUACAACAGUAGCCAAUGAAG2720.851360
NC_002549.1VP35AAAGAGUUCCAAUCUUCCAUGGAAGAUUGGAACUCUUU8450.848065
NC_002549.1VP35AAGGAUUUGAGAAACAUUAUAAUGUUUCUCAAAUCCUU6640.847067
NC_002549.1VP35UCUAAACAGUACCACUUCAUGAAGUGGUACUGUUUAGA6060.846316
NC_002549.1VP35UGAGAACAAUCCAGGAUUAUAAUCCUGGAUUGUUCUCA1410.845705
NC_002549.1VP35UGGAACUGCUUUCCACCAAUUGGUGGAAAGCAGUUCCA7050.845160
NC_002549.1VP35AAAGGAUUUGAGAAACAUUAAUGUUUCUCAAAUCCUUU6630.844884
NC_002549.1VP35CUAAAGCCAGUUUAUGAUAUAUCAUAAACUGGCUUUAG3520.844418
NC_002549.1VP35GAUAUGGCAAAAACAAUCUAGAUUGUUUUUGCCAUAUC3670.843475
NC_002549.1VP35AGAACAACGCAUUACGAGUACUCGUAAUGCGUUGUUCU3210.842831
NC_002549.1VP35CAAUCAUAGUUUUGAGGAGCUCCUCAAAACUAUGAUUG2370.842506
NC_002549.1VP35AGGUUGGGUAUGUGUUUUUAAAAACACAUACCCAACCU9660.842478
NC_002549.1VP35GAGAACAAUCCAGGAUUAUAUAAUCCUGGAUUGUUCUC1420.842187
NC_002549.1VP35AAUGGUCUAAAGCCAGUUUAAACUGGCUUUAGACCAUU3460.841529
NC_002549.1VP35GCAAUCAUAGUUUUGAGGAUCCUCAAAACUAUGAUUGC2360.841461
NC_002549.1VP35UACUGCGGCCACGACUCAAUUGAGUCGUGGCCGCAGUA300.841102
NC_002549.1VP35CAAAAACAAUCUCCUCAUUAAUGAGGAGAUUGUUUUUG3740.840506
NC_002549.1VP35GCAUUCAACAAUCUAAACAUGUUUAGAUUGUUGAAUGC5950.839860
NC_002549.1VP35ACAUCUUCUGUGAUAUUGAUCAAUAUCACAGAAGAUGU1250.839312
NC_002549.1VP35AAAACAAUCUCCUCAUUGAUCAAUGAGGAGAUUGUUUU3760.838222
NC_002549.1VP35CGCGCAACAGUCAAACCCAUGGGUUUGACUGUUGCGCG2030.837675
NC_002549.1VP35AUUAUGCUACGCAUCCCAAUUGGGAUGCGUAGCAUAAU1560.836818
NC_002549.1VP35CCAAGAUGCUGCUCCACCUAGGUGGAGCAGCAUCUUGG8610.834007
NC_002549.1VP35AAAGUGUUAGGGAGGCAUUAAUGCCUCCCUAACACUUU5810.833601
NC_002549.1VP35UCAAAUUACAAAAAGAGUUAACUCUUUUUGUAAUUUGA8340.833289
NC_002549.1VP35AUGGUCUAAAGCCAGUUUAUAAACUGGCUUUAGACCAU3470.830653
NC_002549.1VP35GGUGACAUUCCCCGAGCUUAAGCUCGGGGAAUGUCACC9010.830580
NC_002549.1VP35GAACUGCUUUCCACCAAUUAAUUGGUGGAAAGCAGUUC7070.830364
NC_002549.1VP35GAUUGAUCGAGGUUGGGUAUACCCAACCUCGAUCAAUC9570.830240
NC_002549.1VP35AAACGGACCCAAUUUGCAAUUGCAAAUUGGGUCCGUUU2210.829691
NC_002549.1VP35GAGGUUGGGUAUGUGUUUUAAAACACAUACCCAACCUC9650.829472
NC_002549.1VP35GCUACGCAUCCCAAAUGCAUGCAUUUGGGAUGCGUAGC1610.827914
NC_002549.1VP35ACAGUCAAACCCAAACGGAUCCGUUUGGGUUUGACUGU2090.826715
NC_002549.1VP35GAACAGGGUUUGUGCUGAGCUCAGCACAAACCCUGUUC3930.825812
NC_002549.1VP35GCAAAAACAAUCUCCUCAUAUGAGGAGAUUGUUUUUGC3730.823753
NC_002549.1VP35CAAACGGACCCAAUUUGCAUGCAAAUUGGGUCCGUUUG2200.822851
NC_002549.1VP35CUCUCCUCAAUGUGCCCUAUAGGGCACAUUGAGGAGAG8130.822816
NC_002549.1VP35AAGAUAGCAACUCAUUGGAUCCAAUGAGUUGCUAUCUU7520.822135
NC_002549.1VP35CUUCAAGAUGGUAAAACACGUGUUUUACCAUCUUGAAG9880.822061
NC_002549.1VP35UCCUCAAUGUGCCCUAAUUAAUUAGGGCACAUUGAGGA8160.821928
NC_002549.1VP35UAUGAUAUGGCAAAAACAAUUGUUUUUGCCAUAUCAUA3640.821845
NC_002549.1VP35AACAGGGUUUGUGCUGAGAUCUCAGCACAAACCCUGUU3940.820761
NC_002549.1VP35ACAAUCCAGGAUUAUGCUAUAGCAUAAUCCUGGAUUGU1460.819838
NC_002549.1VP35CAUCGCAUCAGAAUCAUUAUAAUGAUUCUGAUGCGAUG3030.819503
NC_002549.1VP35GGCAAAAACAAUCUCCUCAUGAGGAGAUUGUUUUUGCC3720.816155
NC_002549.1VP35UCAUAGUUUUGAGGAGGUAUACCUCCUCAAAACUAUGA2400.815763
NC_002549.1VP35AUGAUAUGGCAAAAACAAUAUUGUUUUUGCCAUAUCAU3650.815617
NC_002549.1VP35ACAUUUCGGCAAAGGAUUUAAAUCCUUUGCCGAAAUGU6530.814424
NC_002549.1VP35UGUGCCCUAAUUCAAAUUAUAAUUUGAAUUAGGGCACA8230.814367
NC_002549.1VP35CCAGAAAAGCUUGCGUCCAUGGACGCAAGCUUUUCUGG9210.814060
NC_002549.1VP35AGUUUAUGAUAUGGCAAAAUUUUGCCAUAUCAUAAACU3600.813564
NC_002549.1VP35UGCUUUCCACCAAUUAGUAUACUAAUUGGUGGAAAGCA7110.812310
NC_002549.1VP35CUUUCCACCAAUUAGUACAUGUACUAAUUGGUGGAAAG7130.810819
NC_002549.1VP35CAAGUGAUUUGUAAAUUGGCCAAUUUACAAAUCACUUG7300.810432
NC_002549.1VP35GAAAGUGCGAUUCGGGGUAUACCCCGAAUCGCACUUUC5320.810208
NC_002549.1VP35UCCCAAAUGCAACAAACGAUCGUUUGUUGCAUUUGGGA1690.809942
NC_002549.1VP35GUUAGGGAGGCAUUCAACAUGUUGAAUGCCUCCCUAAC5860.809138
NC_002549.1VP35CGCAUCAGAAUCAUUAGAAUUCUAAUGAUUCUGAUGCG3060.809115
NC_002549.1VP35UUCCUGUAAGCGACAUCUUAAGAUGUCGCUUACAGGAA1130.807539
NC_002549.1VP35UGAGCAGCUAAUGACCGGAUCCGGUCAUUAGCUGCUCA900.805921
NC_002549.1VP35UGACAUUUCGGCAAAGGAUAUCCUUUGCCGAAAUGUCA6510.805814
NC_002549.1VP35AGCUUGCCAGAAAAGCUUGCAAGCUUUUCUGGCAAGCU9150.805266
NC_002549.1VP35GCAUCCCAAAUGCAACAAAUUUGUUGCAUUUGGGAUGC1660.804210
NC_002549.1VP35ACUGCUUUCCACCAAUUAGCUAAUUGGUGGAAAGCAGU7090.803422
NC_002549.1VP35AGCAGCUAAUGACCGGAAGCUUCCGGUCAUUAGCUGCU920.802327
NC_002549.1VP35UGUUGUGCAACAACAAACCGGUUUGUUGUUGCACAACA2850.802182
NC_002549.1VP35ACGAAGCCAAACCCGAAGAUCUUCGGGUUUGGCUUCGU1840.801995
NC_002549.1VP35AAUGUGCCCUAAUUCAAAUAUUUGAAUUAGGGCACAUU8210.800726
NC_002549.1VP35UGUAAGCGACAUCUUCUGUACAGAAGAUGUCGCUUACA1170.800644