Welcome to Sequence Card of Peptide
Details of SAPdb entry with Sequence AG |
| Primary information | |
|---|---|
| SAPdb ID | 1236, |
| PMID | 20695592 |
| Peptide Name | Dipeptide 1 |
| Peptide sequence | AG |
| N-Terminal Modification | Napthalene |
| C-Terminal Modification | Free |
| Non-Terminal Modification | None |
| Length | 2 |
| Peptide/Conjuagate | Peptide |
| Conjugate partner | None |
| Technique | Transmission Electron Microscopy (TEM) |
| Solvent | Water + NaOH + 8.75 mg/ml GdL(glucono-delta-lactone) |
| Method | Dipeptide solution mixed with equimolar solution of 0.1M NaOH followd by gentle stirring for 30 minutes to obtain clear solution. Then to lower the pH GdL is added and kept it undisturbed for 24 hours to get gel. |
| Conc | 0.5%wt |
| Temperature | 3.4 +/- 0.2. |
| Temperature | Room temperature |
| Incubation Time | > 24 hours |
| Year | 2010 |
| Self assembly | No |
| Type of Self assembly | No gel formation |
| Tertiary Structure (Technique) | Not Predicted), |
| Linear | |
| NA | |
| NA | |
| None | |
| NA | |
| AG | |
| N[C@@H](Cc1ccc2c(c1)cccc2)C(=O)NCC=O | |
| Primary information | |
| SAPdb ID | 1242, |
| PMID | 20695592 |
| Peptide Name | Dipeptide 8 |
| Peptide sequence | AG |
| N-Terminal Modification | Bromo-Napthalene or napthalene derivative |
| C-Terminal Modification | Free |
| Non-Terminal Modification | None |
| Length | 2 |
| Peptide/Conjuagate | Conjugate |
| Conjugate partner | Bromo-Napthalene |
| Technique | Transmission Electron Microscopy (TEM) |
| Solvent | Deionized water + 0.1 M Sodium hydroxide + glucono-Å’Â¥-lactone (GdL) |
| Method | Stock solutions of dipeptide-conjugates at a concentration of (0.5 wt%) were prepared and equimolar NaOH (0.1M ) added to it. These were then diluted with pH 10 water to a number of concentrations. To adjust the pH, for each dipeptide-conjugate solution and required quantity of GdL is added to solution to ensure final pH between 3.2 -3.6. Samples were left to stand at least 24 h. |
| Conc | 0.5 wt% |
| Temperature | 3.4 +/- 0.2. |
| Temperature | Room temperature |
| Incubation Time | 24 hours |
| Year | 2010 |
| Self assembly | Yes |
| Type of Self assembly | Transparent Gel |
| Tertiary Structure (Technique) | Not Predicted), |
| Linear | |
| NA | |
| NA | |
| Hydrogel | |
| NA | |
| AG | |
| N.A. | |
| Primary information | |
| SAPdb ID | 1248, |
| PMID | 20695592 |
| Peptide Name | Dipeptide 14 |
| Peptide sequence | AG |
| N-Terminal Modification | Cyano-Napthalene or napthalene derivative |
| C-Terminal Modification | Free |
| Non-Terminal Modification | None |
| Length | 2 |
| Peptide/Conjuagate | Conjugate |
| Conjugate partner | Nitrile-Napthalene |
| Technique | Transmission Electron Microscopy (TEM) |
| Solvent | Deionized water + 0.1 M Sodium hydroxide + glucono-Å’Â¥-lactone (GdL) |
| Method | Stock solutions of dipeptide-conjugates at a concentration of (0.5 wt%) were prepared and equimolar NaOH (0.1M ) added to it. These were then diluted with pH 10 water to a number of concentrations. To adjust the pH, for each dipeptide-conjugate solution and required quantity of GdL is added to solution to ensure final pH between 3.2 -3.6. Samples were left to stand at least 24 h. |
| Conc | 0.5 wt% |
| Temperature | 3.4 +/- 0.2. |
| Temperature | Room temperature |
| Incubation Time | 24 hours |
| Year | 2010 |
| Self assembly | Yes |
| Type of Self assembly | Turbid Gel |
| Tertiary Structure (Technique) | Not Predicted), |
| Linear | |
| NA | |
| NA | |
| Other | |
| NA | |
| AG | |
| N.A. | |
| Primary information | |
| SAPdb ID | 1385, |
| PMID | 24611271 |
| Peptide Name | (LMWG)1 |
| Peptide sequence | AG |
| N-Terminal Modification | 2-[(6-bromonaphthalen-2-yl)oxy]acetic acid |
| C-Terminal Modification | Free |
| Non-Terminal Modification | None |
| Length | 2 |
| Peptide/Conjuagate | Peptide |
| Conjugate partner | None |
| Technique | Scanning Electron Microscopy (SEM) and SANS (small angle neutron scattering) |
| Solvent | Water + 1.0M NaOH + 8.7 mg/ml GdL (glucono-d-lactone) |
| Method | Dipeptide solution prepared at a concentration of 0.5 wt% in water. one molar equivalent of NaOH (1.0 M) solution into the stock solution of dipeptide for pH adjustment. 2 mL of the stock solution was added the required amount of GdL (8.7 mg/ml). The sample was swirled to dissolve the GdL, and then allowed to stand at the required temperature. |
| Conc | 0.5 wt% |
| Temperature | 10.7 |
| Temperature | 10 - 40 °C |
| Year | 2014 |
| Self assembly | Yes |
| Type of Self assembly | Hydrogel (Fibril network) |
| Tertiary Structure (Technique) | Not Predicted), |
| Linear | |
| Structure of dipeptide given in paper | |
| NA | |
| Hydrogel | |
| 120 | |
| AG | |
| N.A. | |
| Primary information | |
| SAPdb ID | 1474, |
| PMID | 22651803 |
| Peptide Name | Dipeptide1 |
| Peptide sequence | AG |
| N-Terminal Modification | Napthalene |
| C-Terminal Modification | Free |
| Non-Terminal Modification | None |
| Length | 2 |
| Peptide/Conjuagate | Peptide |
| Conjugate partner | None |
| Technique | Scanning Electron Microscopy (SEM) and X - Ray Diffraction |
| Solvent | Water + 0.1 M NaOH |
| Method | 25mg of dipeptide was suspended in deionized 5ml water . An equimolar amount of NaOH (0.1 M,aq) was added, and the solution was gently stirred until a clear solution was formed. Glucono-Å’Â¥- lactone (GdL) was added to the solution and the samples were gently swirled to dissolve the GdL before being left to stand for 24 h without stirring to form gel. |
| Conc | 5mg/ml or 0.5%wt |
| Temperature | Room temperature |
| Incubation Time | 24 hours |
| Year | 2012 |
| Self assembly | Yes |
| Type of Self assembly | Crystal structure |
| Tertiary Structure (Technique) | Not Predicted), |
| Linear | |
| NA | |
| NA | |
| Other | |
| NA | |
| AG | |
| N[C@@H](Cc1ccc2c(c1)cccc2)C(=O)NCC=O | |
| Primary information | |
| SAPdb ID | 1513, |
| PMID | 20695592 |
| Peptide Name | Dipeptide 1 |
| Peptide sequence | AG |
| N-Terminal Modification | Napthalene |
| C-Terminal Modification | Free |
| Non-Terminal Modification | None |
| Length | 2 |
| Peptide/Conjuagate | Peptide |
| Conjugate partner | None |
| Technique | Transmission Electron Microscopy (TEM) |
| Solvent | Water + NaOH + 8.75 mg/ml GdL(glucono-delta-lactone) |
| Method | Dipeptide solution mixed with equimolar solution of 0.1M NaOH followd by gentle stirring for 30 minutes to obtain clear solution. Then to lower the pH GdL is added and kept it undisturbed for 24 hours to get gel. |
| Conc | 0.5%wt |
| Temperature | 3.4 +/- 0.2. |
| Temperature | Room temperature |
| Incubation Time | > 24 hours |
| Year | 2010 |
| Self assembly | No |
| Type of Self assembly | No gel formation |
| Tertiary Structure (Technique) | Not Predicted), |
| Linear | |
| NA | |
| NA | |
| None | |
| NA | |
| AG | |
| N[C@@H](Cc1ccc2c(c1)cccc2)C(=O)NCC=O | |
| Primary information | |
| SAPdb ID | 1519, |
| PMID | 20695592 |
| Peptide Name | Dipeptide 7 |
| Peptide sequence | AG |
| N-Terminal Modification | Bromo-Napthalene or napthalene derivative |
| C-Terminal Modification | Free |
| Non-Terminal Modification | None |
| Length | 2 |
| Peptide/Conjuagate | Peptide |
| Conjugate partner | None |
| Technique | Transmission Electron Microscopy (TEM) |
| Solvent | Water + NaOH + 8.75 mg/ml GdL(glucono-delta-lactone) |
| Method | Dipeptide solution mixed with equimolar solution of 0.1M NaOH followd by gentle stirring for 30 minutes to obtain clear solution. Then to lower the pH GdL is added and kept it undisturbed for 24 hours to get gel. |
| Conc | 0.5%wt |
| Temperature | 3.4 +/- 0.2. |
| Temperature | Room temperature |
| Incubation Time | > 24 hours |
| Year | 2010 |
| Self assembly | Yes |
| Type of Self assembly | Transparent gel |
| Tertiary Structure (Technique) | Not Predicted), |
| Linear | |
| NA | |
| Stable | |
| Hydrogel | |
| NA | |
| AG | |
| N.A. | |
| Primary information | |
| SAPdb ID | 1525, |
| PMID | 20695592 |
| Peptide Name | Dipeptide 13 |
| Peptide sequence | AG |
| N-Terminal Modification | Cyano-Napthalene or napthalene derivative |
| C-Terminal Modification | Free |
| Non-Terminal Modification | None |
| Length | 2 |
| Peptide/Conjuagate | Peptide |
| Conjugate partner | None |
| Technique | Transmission Electron Microscopy (TEM) |
| Solvent | Water + NaOH + 8.75 mg/ml GdL(glucono-delta-lactone) |
| Method | Dipeptide solution mixed with equimolar solution of 0.1M NaOH followd by gentle stirring for 30 minutes to obtain clear solution. Then to lower the pH GdL is added and kept it undisturbed for 24 hours to get gel. |
| Conc | 0.5%wt |
| Temperature | 3.4 +/- 0.2. |
| Temperature | Room temperature |
| Incubation Time | > 24 hours |
| Year | 2010 |
| Self assembly | Yes |
| Type of Self assembly | Turbid gel |
| Tertiary Structure (Technique) | Not Predicted), |
| Linear | |
| NA | |
| NA | |
| Hydrogel | |
| NA | |
| AG | |
| N.A. | |
| Primary information | |
| SAPdb ID | 1531, |
| PMID | 20717593 |
| Peptide Name | Gelator1 |
| Peptide sequence | AG |
| N-Terminal Modification | Bromo-Napthalene or napthalene derivative |
| C-Terminal Modification | Free |
| Non-Terminal Modification | None |
| Length | 2 |
| Peptide/Conjuagate | Peptide |
| Conjugate partner | None |
| Technique | Transmission Electron Microscopy (TEM) |
| Solvent | Water + NaOH + GdL(glucono-delta-lactone) |
| Conc | 0.5%wt |
| Temperature | 3.6 |
| Temperature | Room temperature |
| Incubation Time | 34 minutes |
| Year | 2010 |
| Self assembly | Yes |
| Type of Self assembly | Gel (Consists of thicker fibers) |
| Tertiary Structure (Technique) | Not Predicted), |
| Linear | |
| NA | |
| NA | |
| Hydrogel | |
| NA | |
| AG | |
| N.A. | |
| Primary information | |
| SAPdb ID | 1532, |
| PMID | 20717593 |
| Peptide Name | Gelator1 + Dextran |
| Peptide sequence | AG |
| N-Terminal Modification | Bromo-Napthalene or napthalene derivative |
| C-Terminal Modification | Free |
| Non-Terminal Modification | None |
| Length | 2 |
| Peptide/Conjuagate | Mixture |
| Conjugate partner | Dextran (17-33% wt) |
| Technique | Transmission Electron Microscopy (TEM) |
| Solvent | Water + NaOH + GdL(glucono-delta-lactone) |
| Conc | 0.5%wt |
| Temperature | 3.6 |
| Temperature | Room temperature |
| Incubation Time | 34 minutes |
| Year | 2010 |
| Self assembly | Yes |
| Type of Self assembly | Gel (Consists of thinner fibers) |
| Tertiary Structure (Technique) | Not Predicted), |
| Linear | |
| NA | |
| NA | |
| Hydrogel | |
| NA | |
| AG | |
| N.A. | |