SAPdb_ID | Peptide Name | Peptide Sequence | N-Terminal Modification | C-Terminal Modification | Technique | Type of Self-assembly | PMID |
---|---|---|---|---|---|---|---|
1143 | FYK | FYK | Free | Free | Transmission Electron Microscopy (TEM), DLS (Dynamic Light Scattering) and FTIR (Fourier Transform Infrared) | Solution | 25515887 |
1144 | GGG | GGG | Free | Free | Transmission Electron Microscopy (TEM), DLS (Dynamic Light Scattering) and FTIR (Fourier Transform Infrared) | Solution | 25515887 |
1145 | D-Phe-Phe-Val (II), | fFV | Free | Free | AFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy) | Twisted or elongated fibril structure | 24700146 |
1146 | D-Phe-Phe-Val (II), | fFV | Free | Free | AFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy) | Hydrogel | 24700146 |
1147 | Phe-D-Phe-Val (III), | FfV | Free | Free | AFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy) | Filaments with globular structure | 24700146 |
1148 | Phe-Phe-D-Val (IV) | FFv | Free | Free | AFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy) | Globular structure | 24700146 |
1149 | Phe-D-Phe-D-Val (II) | Ffv | Free | Free | AFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy) | Elongated fibres | 24700146 |
1150 | D-Phe-Phe-D-Val (III) | fFv | Free | Free | AFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy) | Twisted fibril structure | 24700146 |
1151 | D-Phe-D-Phe-Val (IV) | ffV | Free | Free | AFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy) | Crystal needles | 24700146 |
1152 | Phe-Phe-Val (I) | FFV | Free | Free | AFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy) | Disordered structure | 24700146 |
1153 | D-Phe-D-Phe-D-Val (I) | ffv | Free | Free | AFM (Atomic Force Microscopy), Cryo - Transmission Electron Microscopy (TEM), FTIR (Fourier Transform Infrared), CD (Circular Dichroism spectroscopy) | Disordered structure | 24700146 |
1167 | Fmoc-RGD | RGD | Fmoc [or N-(fluorenyl-9-methoxycarbonyl)] | Free | Cryo - Transmission Electron Microscopy (TEM) | Hydogel | 22852757 |
1168 | Ac-ID3 | IVD | Acetylation | Free | FE - SEM (Field Emission Scanning Electron Microscopy) | Hydrogel | 23267112 |
1172 | Nap-FFG | FFG | Napthalene | Free | Cryo - Transmission Electron Microscopy (TEM) | Hydrogel | 23240879 |
1173 | Nap-FFA | FFA | Napthalene | Free | Cryo - Transmission Electron Microscopy (TEM) | Hydrogel | 23240879 |
1174 | Nap-FFS | FFS | Napthalene | Free | Cryo - Transmission Electron Microscopy (TEM) | Hydrogel | 23240879 |
1175 | Nap-FFK | FFK | Napthalene | Free | Cryo - Transmission Electron Microscopy (TEM) | Hydrogel | 23240879 |
1176 | Nap-FFE | FFE | Napthalene | Free | Cryo - Transmission Electron Microscopy (TEM) | No hydrogel formation | 23240879 |
1180 | Tripeptide 1 | KKK | Fmoc [or N-(fluorenyl-9-methoxycarbonyl)] | Free | Transmission Electron Microscopy (TEM), AFM (Atomic Force Microscopy) | Nanofibers | 22543454 |
1181 | Tripeptide 2 | KKK | Acetylation | Free | Transmission Electron Microscopy (TEM), AFM (Atomic Force Microscopy) | Twisted Nanoribbon | 22543454 |
1182 | Tripeptide 3 | KKK | Free | Free | Transmission Electron Microscopy (TEM), AFM (Atomic Force Microscopy) | Nanosphere | 22543454 |
1183 | TriPhenylalanine | FFF | Free | Free | Insilico method: MARTINI coarse - grained molecular dynamic | Nanospheres (in seven out of ten trajectories), Nanorods ( in the 3 out of 10 trajectories) | 24468750 |
1184 | TriPhenylalanine | FFF | Free | Free | Insilico method: MARTINI coarse - grained molecular dynamic | Nanorod | 24468750 |
1185 | TriPhenylalanine | FFF | Free | Free | Insilico method: MARTINI coarse - grained molecular dynamic | Nanosphere | 24468750 |
1186 | TriPhenylalanine | FFF | Free | Free | Insilico method: MARTINI coarse - grained molecular dynamic | Nanorods and Nanosphere | 24468750 |
1190 | Pro-Lys dipeptide 1 | PK | Free | 1,4,5,8-naphthalenetetracarboxylic acid diimide (NDI) | Transmission Electron Microscopy (TEM) | Nanotube, Nanofibers and helical twisted Nanoribbon mixture | 26360936 |
1191 | Pro-Lys dipeptide 1 | PK | Free | 1,4,5,8-naphthalenetetracarboxylic acid diimide (NDI) | Transmission Electron Microscopy (TEM) | Nanotube | 26360936 |
1214 | 2-Thiopene diPhenyl alanine | FF | 2-thiopene | Free | Scanning Electron Microscopy (SEM) | Transparent gel (containing Nanofibres) | 25775220 |
1215 | 2-Thiopene diPhenyl alanine | FF | 2-thiopene | Free | Scanning Electron Microscopy (SEM) | Turbid gel (containing Nanospheres) | 25775220 |
1216 | Peptide-porphyrin | FF | Free | Free | Scanning Electron Microscopy (SEM), AFM (Atomic Force Microscopy) and Transmission Electron Microscopy (TEM) | Microsphere | 24482003 |
1218 | Peptide 1 | Boc-m-ABA-Aib-OMe | Boc (or t-butoxycarbonyl) | Methoxy | FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM) | Nanovesicles | 25574757 |
1219 | Peptide 2 | Boc-Aib-m-ABA-OMe | Boc (or t-butoxycarbonyl) | Methoxy | FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM) | Nanotubes | 25574757 |
1220 | Peptide 2 | Boc-Aib-m-ABA-OMe | Boc (or t-butoxycarbonyl) | Methoxy | FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM) | Nanotubes | 25574757 |
1221 | Peptide 2 | Boc-Aib-m-ABA-OMe | Boc (or t-butoxycarbonyl) | Methoxy | FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM) | Nanofibrils | 25574757 |
1222 | Peptide 2 | Boc-Aib-m-ABA-OMe | Boc (or t-butoxycarbonyl) | Methoxy | FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM) | Nanotape | 25574757 |
1223 | Peptide 2 | Boc-Aib-m-ABA-OMe | Boc (or t-butoxycarbonyl) | Methoxy | FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM) | Ribbon like Structure | 25574757 |
1224 | Peptide 2 | Boc-Aib-m-ABA-OMe | Boc (or t-butoxycarbonyl) | Methoxy | FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM) | Ribbon like Structure | 25574757 |
1225 | Peptide 2 | Boc-Aib-m-ABA-OMe | Boc (or t-butoxycarbonyl) | Methoxy | FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM) | Nanotubes | 25574757 |
1229 | Compound 1 | FF | Indole acetic acid | Free | Transmission Electron Microscopy (TEM), AFM (Atomic Force Microscopy) | Hydrogel (Containing Nanofibres) | 25354784 |
1230 | Compound 1 | FF | Indole acetic acid | Free | Transmission Electron Microscopy (TEM), AFM (Atomic Force Microscopy) | Transparent Gel | 25354784 |
1231 | FF | FF | Conjugate with TTF | Amidation | Transmission Electron Microscopy (TEM), AFM (Atomic Force Microscopy), UV - vis - NIR, FTIR and CD (Circular Dichroism spectroscopy) | Organogel (consists of Nanofibers) | 25259412 |
1232 | FF | FF | Conjugate with TTF | Amidation | Transmission Electron Microscopy (TEM), AFM (Atomic Force Microscopy), UV - vis - NIR, FTIR and CD (Circular Dichroism spectroscopy) | Organogel (consists of Nanofibers) | 25259412 |
1233 | FF | FF | Free | Free | Scanning Electron Microscopy (SEM) | Microsphere with microtube | 25198430 |
1234 | FY | FY | Free | Free | Scanning Electron Microscopy (SEM) | Flower like microstructure | 25198430 |
1235 | NapFF | FF | Napthalene | Free | Transmission Electron Microscopy (TEM), Cryo - Scanning Electron Microscopy (SEM) | Hydrogel | 25068387 |
1252 | DiPhenylalanine | FV | Cyano-Napthalene or napthalene derivative | Free | Insilico tools i.e, Coarse - grained molecular dynamics (MD) simulations and GROMACS software | Toroid, ellipsoid, pot shaped and potshaped, and discoid shaped Vesicle like structures | 22468743 |
1253 | DiPhenylalanine | FF | Cyano-Napthalene or napthalene derivative | Free | Insilico tools i.e, Coarse - grained molecular dynamics (MD) simulations and GROMACS software | Flat bilayer with holes shape ( in 9/10 MD runs); Nanotube (in 1/10 MD runs) | 22468743 |
1254 | DiPhenylalanine | FF | Free | Free | Insilico tools i.e, Coarse - grained molecular dynamics (MD) simulations and GROMACS software | Spherical vesicle ( in 7/10 MD runs); Nanotube (in 2/10 MD runs); Bialyer shape (in 1/10 MD runs) | 22468743 |
1255 | DiPhenylalanine | FF | Free | Free | Insilico tools i.e, Coarse - grained molecular dynamics (MD) simulations and GROMACS software | vesicle (in 3/10 MD runs); Nanotube ( in 3/10 MD runs); Flat bialyer with holes shape (in 4/10 MD runs) | 22468743 |
1283 | BrNapAV | AV | Bromine-napthol | Free | Scanning Electron Microscopy (SEM) | Slightly turbid gel (Nanofibers) | 22890605 |