PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

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Citation: Aithal A, Sharma A, Joshi S, Raghava GPS, Varshney GC (2012) PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies. PLoS ONE 7(4): e34613. doi:10.1371/journal.pone.0034613
   
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PolysacDB ID1096
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 4 (field isolate F6)   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polysaccharide structure has a branched tetrasaccharide repeating unit {-->3)-β-d-Galp-(1-->4)-[β-d-Glcp-(1-->3)]-β-d- GalpNAc-(1-->4)-α-l-Rhap-(1-}n. The structure resembles that of the lipopolysaccharide O-chain of A. pleuropneumoniae serotype 7.
BCSDB Structure115743
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 4 cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 7F5
Antibody Type ClassIgG2a
Assay SystemWhole cell ELISA and slide agglutination tests
Cross ReactivityThis Mab failed to recognize surface epitopes located on other bacterial, such as H. parasuis, P. haemolytica, P. multocida capsular types A and D, Haemophilus taxon minor group, and A. suis, K. pneumoniae and B. bronchiseptica. were reactive with 26 serotype 4 isolates,11 serotype 7 isolates, and 1 each of the serotype 1 and non-typeable isolates tested
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis MAb could be useful for the serological diagnostic of animals infected with serotypes 4 and 7 by inhibition ELISA or competition ELISA. Moreover, they could be useful as complementary reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotype 4 or 7
Curator IDAA + AS
Date of Curation28-01-2010
ReferencesPMC170200

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PolysacDB ID1097
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 4 (field isolate F6)   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polysaccharide structure has a branched tetrasaccharide repeating unit {-->3)-β-d-Galp-(1-->4)-[β-d-Glcp-(1-->3)]-β-d- GalpNAc-(1-->4)-α-l-Rhap-(1-}n. The structure resembles that of the lipopolysaccharide O-chain of A. pleuropneumoniae serotype 7.
BCSDB Structure115743
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 4 cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 5B8
Antibody Type ClassIgG2b
Assay SystemWhole cell ELISA and slide agglutination tests
Cross ReactivityThis Mab failed to recognize surface epitopes located on other bacterial, such as H. parasuis, P. haemolytica, P. multocida capsular types A and D, Haemophilus taxon minor group, and A. suis, K. pneumoniae and B. bronchiseptica. were reactive with 26 serotype 4 isolates,11 serotype 7 isolates, and 1 each of the serotype 1 and non-typeable isolates tested
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis MAb could be useful for the serological diagnostic of animals infected with serotypes 4 and 7 by inhibition ELISA or competition ELISA. Moreover, they could be useful as complementary reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotype 4 or 7
Curator IDAA + AS
Date of Curation28-01-2010
ReferencesPMC170200

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PolysacDB ID1098
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 4 (field isolate F6)   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polysaccharide structure has a branched tetrasaccharide repeating unit {-->3)-β-d-Galp-(1-->4)-[β-d-Glcp-(1-->3)]-β-d- GalpNAc-(1-->4)-α-l-Rhap-(1-}n. The structure resembles that of the lipopolysaccharide O-chain of A. pleuropneumoniae serotype 7.
BCSDB Structure115743
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 4 cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 7E6
Antibody Type ClassIgM
Assay SystemWhole cell ELISA and slide agglutination tests
Cross ReactivityThis Mab failed to recognize surface epitopes located on other bacterial, such as H. parasuis, P. haemolytica, P. multocida capsular types A and D, Haemophilus taxon minor group, and A. suis, K. pneumoniae and B. bronchiseptica. were reactive with 25 serotype 4 isolates,10 serotype 7 isolates, recognized to a lesser extent the isolate belonging to serotype 8 and several serotype 1, 3, and nontypeable isolates
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis MAb could be useful for the serological diagnostic of animals infected with serotypes 4 and 7 by inhibition ELISA or competition ELISA. Moreover, they could be useful as complementary reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotype 4 or 7
Curator IDAA + AS
Date of Curation28-01-2010
ReferencesPMC170200

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PolysacDB ID1099
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 4 (field isolate F6)   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polysaccharide structure has a branched tetrasaccharide repeating unit {-->3)-β-d-Galp-(1-->4)-[β-d-Glcp-(1-->3)]-β-d- GalpNAc-(1-->4)-α-l-Rhap-(1-}n. The structure resembles that of the lipopolysaccharide O-chain of A. pleuropneumoniae serotype 7.
BCSDB Structure115743
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 4 cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 5G4
Antibody Type ClassIgM
Assay SystemWhole cell ELISA and slide agglutination tests
Cross ReactivityThis Mab failed to recognize surface epitopes located on other bacterial, such as H. parasuis, P. haemolytica, P. multocida capsular types A and D, Haemophilus taxon minor group, and A. suis, K. pneumoniae and B. bronchiseptica. were reactive with 25 serotype 4 isolates,10 serotype 7 isolates, recognized to a lesser extent the isolate belonging to serotype 8 and several serotype 1, 3, and nontypeable isolates
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis MAb could be useful for the serological diagnostic of animals infected with serotypes 4 and 7 by inhibition ELISA or competition ELISA. Moreover, they could be useful as complementary reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotype 4 or 7
Curator IDAA + AS
Date of Curation29-01-2010
ReferencesPMC170200

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PolysacDB ID1100
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 4 (field isolate F6)   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polysaccharide structure has a branched tetrasaccharide repeating unit {-->3)-β-d-Galp-(1-->4)-[β-d-Glcp-(1-->3)]-β-d- GalpNAc-(1-->4)-α-l-Rhap-(1-}n. The structure resembles that of the lipopolysaccharide O-chain of A. pleuropneumoniae serotype 7.
BCSDB Structure115743
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 4 cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 4f1
Antibody Type ClassIgM
Assay SystemWhole cell ELISA and slide agglutination tests
Cross ReactivityThis Mab failed to recognize surface epitopes located on other bacterial, such as H. parasuis, P. haemolytica, P. multocida capsular types A and D, Haemophilus taxon minor group, and A. suis, K. pneumoniae and B. bronchiseptica. were reactive with 25 serotype 4 isolates,10 serotype 7 isolates, recognized to a lesser extent the isolate belonging to serotype 8 and several serotype 1, 3, and nontypeable isolates
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis MAb could be useful for the serological diagnostic of animals infected with serotypes 4 and 7 by inhibition ELISA or competition ELISA. Moreover, they could be useful as complementary reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotype 4 or 7
Curator IDAA + AS
Date of Curation29-01-2010
ReferencesPMC170200

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PolysacDB ID1101
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 4 (field isolate F6)   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polysaccharide structure has a branched tetrasaccharide repeating unit {-->3)-β-d-Galp-(1-->4)-[β-d-Glcp-(1-->3)]-β-d- GalpNAc-(1-->4)-α-l-Rhap-(1-}n. The structure resembles that of the lipopolysaccharide O-chain of A. pleuropneumoniae serotype 7.
BCSDB Structure115743
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 4 cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 4B8
Antibody Type ClassIgM
Assay SystemWhole cell ELISA and slide agglutination tests
Cross ReactivityThis Mab failed to recognize surface epitopes located on other bacterial, such as H. parasuis, P. haemolytica, P. multocida capsular types A and D, Haemophilus taxon minor group, and A. suis, K. pneumoniae and B. bronchiseptica. were reactive with 25 serotype 4 isolates,10 serotype 7 isolates, recognized to a lesser extent the isolate belonging to serotype 8 and several serotype 1, 3, and nontypeable isolates
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis MAb could be useful for the serological diagnostic of animals infected with serotypes 4 and 7 by inhibition ELISA or competition ELISA. Moreover, they could be useful as complementary reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotype 4 or 7
Curator IDAA + AS
Date of Curation29-01-2010
ReferencesPMC170200

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PolysacDB ID1102
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 4 (field isolate F6)   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polysaccharide structure has a branched tetrasaccharide repeating unit {-->3)-β-d-Galp-(1-->4)-[β-d-Glcp-(1-->3)]-β-d- GalpNAc-(1-->4)-α-l-Rhap-(1-}n. The structure resembles that of the lipopolysaccharide O-chain of A. pleuropneumoniae serotype 7.
BCSDB Structure115743
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 4 cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 7E10
Antibody Type ClassIgM
Assay SystemWhole cell ELISA and slide agglutination tests
Cross ReactivityThis Mab failed to recognize surface epitopes located on other bacterial, such as H. parasuis, P. haemolytica, P. multocida capsular types A and D, Haemophilus taxon minor group, and A. suis, K. pneumoniae and B. bronchiseptica. were reactive with 25 serotype 4 isolates,10 serotype 7 isolates, recognized to a lesser extent the isolate belonging to serotype 8 and several serotype 1, 3, and nontypeable isolates
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis MAb could be useful for the serological diagnostic of animals infected with serotypes 4 and 7 by inhibition ELISA or competition ELISA. Moreover, they could be useful as complementary reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotype 4 or 7
Curator IDAA + AS
Date of Curation29-01-2010
ReferencesPMC170200

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PolysacDB ID1106
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 4 (field isolate F6)   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polysaccharide structure has a branched tetrasaccharide repeating unit {-->3)-β-d-Galp-(1-->4)-[β-d-Glcp-(1-->3)]-β-d- GalpNAc-(1-->4)-α-l-Rhap-(1-}n. The structure resembles that of the lipopolysaccharide O-chain of A. pleuropneumoniae serotype 7.
BCSDB Structure115743
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 4 cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 3E12
Antibody Type ClassIgM
Assay SystemWhole cell ELISA and slide agglutination tests
Cross ReactivityThis Mab failed to recognize surface epitopes located on other bacterial, such as H. parasuis, P. haemolytica, P. multocida capsular types A and D, Haemophilus taxon minor group, and A. suis, K. pneumoniae and B. bronchiseptica. were reactive with 26 serotype 4 isolates,11 serotype 7 isolates, and 1 each of the serotype 1 and non-typeable isolates tested
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis MAb could be useful for the serological diagnostic of animals infected with serotypes 4 and 7 by inhibition ELISA or competition ELISA. Moreover, they could be useful as complementary reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotype 4 or 7
Curator IDAA + AS
Date of Curation31-01-2010
ReferencesPMC170200

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PolysacDB ID1107
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 4 (field isolate F6)   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polysaccharide structure has a branched tetrasaccharide repeating unit {-->3)-β-d-Galp-(1-->4)-[β-d-Glcp-(1-->3)]-β-d- GalpNAc-(1-->4)-α-l-Rhap-(1-}n. The structure resembles that of the lipopolysaccharide O-chain of A. pleuropneumoniae serotype 7.
BCSDB Structure115743
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 4 cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 7C3
Antibody Type ClassIgM
Assay SystemWhole cell ELISA and slide agglutination tests
Cross ReactivityThis Mab failed to recognize surface epitopes located on other bacterial, such as H. parasuis, P. haemolytica, P. multocida capsular types A and D, Haemophilus taxon minor group, and A. suis, K. pneumoniae and B. bronchiseptica. were reactive with 26 serotype 4 isolates,11 serotype 7 isolates, and 1 each of the serotype 1 and non-typeable isolates tested
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis MAb could be useful for the serological diagnostic of animals infected with serotypes 4 and 7 by inhibition ELISA or competition ELISA. Moreover, they could be useful as complementary reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotype 4 or 7
Curator IDAA + AS
Date of Curation31-01-2010
ReferencesPMC170200

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PolysacDB ID1110
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 5 FMV81-750   (NCBI Taxonomy)   (Drugpedia)
Basic StructureIt is a linear unbranched homopolymer of 1,6-linked-D-galactopyranosyl residues.
BCSDB Structure108568
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalinized whole cell antigen (WCA)
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 4.4C6.F7
Antibody Type ClassIgG2
Assay SystemELISA, immunoblotting
Cross ReactivityThis antibody specifically reacted with Serotype5 only
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis MAb could be useful for serotyping analysis in actinobacillus strains
Curator IDAA + AS
Date of Curation01-02-2010
References9249182

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PolysacDB ID1111
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 5 strain 91-178-2005   (NCBI Taxonomy)   (Drugpedia)
Basic StructureIt is a linear unbranched homopolymer of 1,6-linked-D-galactopyranosyl residues.
BCSDB Structure108568
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalinized whole cell antigen (WCA)
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 6.1E7.E3
Antibody Type ClassIgM
Assay SystemELISA, immunoblotting
Cross ReactivityThis antibody specifically reacted with Serotype5 only
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis MAb could be useful for serotyping analysis in actinobacillus strains
Curator IDAA + AS
Date of Curation01-02-2010
References9249182

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PolysacDB ID1113
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 5a   (NCBI Taxonomy)   (Drugpedia)
Basic StructureIt is a linear unbranched homopolymer of 1,6-linked-D-galactopyranosyl residues.
BCSDB Structure108568
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureWhole cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 210-Fll
Antibody Type ClassIgG3
Assay SystemElisa inhibition assay
Cross ReactivityThis antibody reacted only with the reference strains of Actinobacillus serotypes 5a and 5b.
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab can be used for identification of serotype5 cells
Curator IDAA + AS
Date of Curation02-02-2010
ReferencesPMC1189361

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PolysacDB ID1114
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 5b   (NCBI Taxonomy)   (Drugpedia)
Basic StructureIt is a linear unbranched homopolymer of 1,6-linked-D-galactopyranosyl residues.
BCSDB Structure108568
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureWhole cells
Carrier NameNil
Conjugate MethodNil
AntibodiesAntisera
Antibody Type ClassN/A
Assay SystemElisa inhibition assay
Cross ReactivityThis antibody reacted only with the reference strains of Actinobacillus serotypes 5
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab can be used for identification of serotype5 cells
Curator IDAA + AS
Date of Curation02-02-2010
ReferencesPMC1189361

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PolysacDB ID1115
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 1 shope 4074   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polsaccharide structure is as follows :
--6)-α-D-Glcp-(1-->2)-α-L-Rhap-(l-->2)-α-L-Rhap-(1--. which is linked to 1-D-GlcpNAc chains on its rhamnopyranosyl residue via 1-->3 linkage.
BCSDB StructureN/A
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 1 cells (strain Shope 4074]
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 3E10
Antibody Type ClassIgG2b
Assay SystemELISA, Rapid Dot ELISA and Slide agglutination test
Cross ReactivityThis antibody cross-reacted with reference strains of serotypes 1, 9 and 11
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab may provide reliable specific tools for rapid serological diagnosis of animals infected with serotypes 1, 9 and 11 by inhibition or competition ELISA. Moreover, these mAbs could be useful as a complementary specific reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotypes 1, 9 and 11
Curator IDAA + AS
Date of Curation03-02-2010
References9116634

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PolysacDB ID1116
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 1 shope 4074   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polsaccharide structure is as follows :
--6)-α-D-Glcp-(1-->2)-α-L-Rhap-(l-->2)-α-L-Rhap-(1--. which is linked to 1-D-GlcpNAc chains on its rhamnopyranosyl residue via 1-->3 linkage.
BCSDB StructureN/A
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 1 cells (strain Shope 4074]
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 4B7
Antibody Type ClassIgG2a
Assay SystemELISA, Rapid Dot ELISA and Slide agglutination test
Cross ReactivityThis antibody cross-reacted with reference strains of serotypes 1, 9 and 11
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab may provide reliable specific tools for rapid serological diagnosis of animals infected with serotypes 1, 9 and 11 by inhibition or competition ELISA. Moreover, these mAbs could be useful as a complementary specific reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotypes 1, 9 and 11
Curator IDAA + AS
Date of Curation03-02-2010
References9116634

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PolysacDB ID1117
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 1 shope 4074   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polsaccharide structure is as follows :
--6)-α-D-Glcp-(1-->2)-α-L-Rhap-(l-->2)-α-L-Rhap-(1--. which is linked to 1-D-GlcpNAc chains on its rhamnopyranosyl residue via 1-->3 linkage.
BCSDB StructureN/A
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 1 cells (strain Shope 4074]
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 9H5
Antibody Type ClassIgG3
Assay SystemELISA, Rapid Dot ELISA and Slide agglutination test
Cross ReactivityThis antibody cross-reacted with reference strains of serotypes 1, 9 and 11
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab may provide reliable specific tools for rapid serological diagnosis of animals infected with serotypes 1, 9 and 11 by inhibition or competition ELISA. Moreover, these mAbs could be useful as a complementary specific reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotypes 1, 9 and 11
Curator IDAA + AS
Date of Curation03-02-2010
References9116634

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PolysacDB ID1118
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 1 shope 4074   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polsaccharide structure is as follows :
--6)-α-D-Glcp-(1-->2)-α-L-Rhap-(l-->2)-α-L-Rhap-(1--. which is linked to 1-D-GlcpNAc chains on its rhamnopyranosyl residue via 1-->3 linkage.
BCSDB StructureN/A
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 1 cells (strain Shope 4074]
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 11C3
Antibody Type ClassIgM
Assay SystemELISA, Rapid Dot ELISA and Slide agglutination test
Cross ReactivityThis antibody cross-reacted with reference strains of serotypes 1, 9 and 11
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab may provide reliable specific tools for rapid serological diagnosis of animals infected with serotypes 1, 9 and 11 by inhibition or competition ELISA. Moreover, these mAbs could be useful as a complementary specific reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotypes 1, 9 and 11
Curator IDAA + AS
Date of Curation04-02-2010
References9116634

Record - 18 of 226   [TOP]

PolysacDB ID1119
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 1 shope 4074   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polsaccharide structure is as follows :
--6)-α-D-Glcp-(1-->2)-α-L-Rhap-(l-->2)-α-L-Rhap-(1--. which is linked to 1-D-GlcpNAc chains on its rhamnopyranosyl residue via 1-->3 linkage.
BCSDB StructureN/A
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 1 cells (strain Shope 4074]
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 3B10
Antibody Type ClassIgM
Assay SystemELISA, Rapid Dot ELISA and Slide agglutination test
Cross ReactivityThis antibody cross-reacted with reference strains of serotypes 1, 9 and 11
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab may provide reliable specific tools for rapid serological diagnosis of animals infected with serotypes 1, 9 and 11 by inhibition or competition ELISA. Moreover, these mAbs could be useful as a complementary specific reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotypes 1, 9 and 11
Curator IDAA + AS
Date of Curation04-02-2010
References9116634

Record - 19 of 226   [TOP]

PolysacDB ID1120
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 1 shope 4074   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polsaccharide structure is as follows :
--6)-α-D-Glcp-(1-->2)-α-L-Rhap-(l-->2)-α-L-Rhap-(1--. which is linked to 1-D-GlcpNAc chains on its rhamnopyranosyl residue via 1-->3 linkage.
BCSDB StructureN/A
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 1 cells (strain Shope 4074]
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 9Hl
Antibody Type ClassIgM
Assay SystemELISA, Rapid Dot ELISA and Slide agglutination test
Cross ReactivityThis antibody cross-reacted with reference strains of serotypes 1, 9 and 11
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab may provide reliable specific tools for rapid serological diagnosis of animals infected with serotypes 1, 9 and 11 by inhibition or competition ELISA. Moreover, these mAbs could be useful as a complementary specific reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotypes 1, 9 and 11
Curator IDAA + AS
Date of Curation05-02-2010
References9116634

Record - 20 of 226   [TOP]

PolysacDB ID1121
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 1 shope 4074   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polsaccharide structure is as follows :
--6)-α-D-Glcp-(1-->2)-α-L-Rhap-(l-->2)-α-L-Rhap-(1--. which is linked to 1-D-GlcpNAc chains on its rhamnopyranosyl residue via 1-->3 linkage.
BCSDB StructureN/A
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 1 cells (strain Shope 4074]
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 5D6
Antibody Type ClassIgM
Assay SystemELISA, Rapid Dot ELISA and Slide agglutination test
Cross ReactivityThis antibody cross-reacted with reference strains of serotypes 1 and 11
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab may provide reliable specific tools for rapid serological diagnosis of animals infected with serotypes 1 and 11 by inhibition or competition ELISA. Moreover, these mAbs could be useful as a complementary specific reagents to polyclonal sera for serotyping of field isolates belonging to A. pleuropneumoniae serotypes 1 and 11
Curator IDAA + AS
Date of Curation06-02-2010
References9116634

Record - 21 of 226   [TOP]

PolysacDB ID1122
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 1   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polsaccharide structure is as follows :
--6)-α-D-Glcp-(1-->2)-α-L-Rhap-(l-->2)-α-L-Rhap-(1--. which is linked to 1-D-GlcpNAc chains on its rhamnopyranosyl residue via 1-->3 linkage.
BCSDB StructureN/A
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 1 cells
Carrier NameNil
Conjugate MethodNil
AntibodiesPolysera
Antibody Type ClassN/A
Assay SystemELISA
Cross ReactivityThis antibody cross-reacted with serotypes 9 and 11
Proposed EpitopeThe epitope was deduced to contain the terminal nonreducing -D-Glc NAc residues
IEDB EpitopeN/A
Proposed UtilityThis antisera not only helped in serotyping analysis but also helped in deducing the epitopes recognized
Curator IDAA + AS
Date of Curation06-02-2010
ReferencesPMC206369

Record - 22 of 226   [TOP]

PolysacDB ID1123
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 9   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe structure consists of trisaccharide backbone randomly substituted by N-acetyl-β-D-glucosamine end groups (to the extent of 25%)
BCSDB Structure131785
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureFormalin-fixed A. pleuropneumoniae serotype 9 cells
Carrier NameNil
Conjugate MethodNil
AntibodiesPolysera
Antibody Type ClassN/A
Assay SystemELISA
Cross ReactivityThis antibody cross-reacted with serotypes 1 and 12. also cross-reacted with deaminated Serotype1 O-PS
Proposed EpitopeThe epitope was deduced to contain the terminal nonreducing -D-Glc NAc residues. A second epitope was said to be directed to linear regions of the backbone polymer
IEDB EpitopeN/A
Proposed UtilityThis antisera not only helped in serotyping analysis but also helped in deducing the epitopes recognized
Curator IDAA + AS
Date of Curation06-02-2010
ReferencesPMC206369

Record - 23 of 226   [TOP]

PolysacDB ID1136
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 5   (NCBI Taxonomy)   (Drugpedia)
Basic StructureIt is a linear unbranched homopolymer of 1,6-linked-D-galactopyranosyl residues.
BCSDB Structure108568
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureWhole cells
Carrier NameNil
Conjugate MethodNil
Antibodies5Mab-1
Antibody Type ClassIgM
Assay SystemELISA inhibition tests
Cross ReactivityThis Mab was specific to serotype 5 strains
Proposed EpitopeThe epitope was proposed to consist of of β-1,6-linked D-galactose residues
IEDB EpitopeN/A
Proposed UtilityThis Mab can be used for specially distinguishing serotype 5 strains
Curator IDAA + AS
Date of Curation12-02-2010
References1384404

Record - 24 of 226   [TOP]

PolysacDB ID1138
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameActinobacillus pleuropneumoniae serotype 1   (NCBI Taxonomy)   (Drugpedia)
Basic StructureThe O-polsaccharide structure is as follows :
--6)-α-D-Glcp-(1-->2)-α-L-Rhap-(l-->2)-α-L-Rhap-(1--. which is linked to 1-D-GlcpNAc chains on its rhamnopyranosyl residue via 1-->3 linkage.
BCSDB StructureN/A
Proposed FunctionLPS is an important virulence factor. It molecule plays an important role in adherence of the bacterium to porcine respiratory tract cells and mucus
Antigenic NatureWhole cells
Carrier NameNil
Conjugate MethodNil
AntibodiesLMab-5
Antibody Type ClassIgM
Assay SystemELISA inhibition tests
Cross ReactivityIMAb-5 reacted with serotype 1, 9 and 11 strains at the same degree and its epitope was found to be located on O-polysaccharide of serotype 1, 9 or 11 lipopolysaccharide (LPS)
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab can be useful for serotyping studies
Curator IDAA + AS
Date of Curation13-02-2010
References1382625

Record - 25 of 226   [TOP]

PolysacDB ID1225
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
Microbe NameBrucella abortus 2308   (NCBI Taxonomy)   (Drugpedia)
Basic StructureBrucella O-PS structure has been defined as homopolymers of 4,6-dideoxy-4-formamido-α-D-mannopyranose residues
BCSDB StructureN/A
Proposed FunctionN/A
Antigenic NatureIrradiated cells of B. abortus smooth strain 2308
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 34
Antibody Type ClassN/A
Assay SystemELISA, invivo protection studies
Cross ReactivityN/A
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab confers protection in mice against experimental brucellosis
Curator IDAA + AS
Date of Curation23-03-2010
ReferencesPMC260994

Department of Computational Biology, Indraprastha Institute of Information Technology, Sec - 39A, New Delhi, India - 110020