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| PolysacDB ID | 1663 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 4 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 134896 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Serovar 4-specific neoglycoprotein, 4-0-methyl-a-L-rhamnopyranosyl(1--> 4)-2-0 - methyl - alpha - L fucopyranosyl oxynonanoyl-bovine serum albumin (BSA) (neoantigen 4) along with whole washed M. avium complex serovar 4 cells and corresponding serovar 4 glycopeptidolipid antigens |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 32B8 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with whole cells of serovar 4, acetylated-GPL-4, and GPL-4 |
| Proposed Epitope | 4-O-methyl-α-L-rhamnopyranosyl-(1-->4)-2-O-methyl-α-L-fucopyranosyl residues seemed to be a part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 01-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1664 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 4 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 134896 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Serovar 4-specific neoglycoprotein, 4-0-methyl-a-L-rhamnopyranosyl(1--> 4)-2-0 - methyl - alpha - L fucopyranosyl oxynonanoyl-bovine serum albumin (BSA) (neoantigen 4) along with whole washed M. avium complex serovar 4 cells and corresponding serovar 4 glycopeptidolipid antigens |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 33F7 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with whole cells of serovar 4, acetylated-GPL-4, and GPL-4 |
| Proposed Epitope | 4-O-methyl-α-L-rhamnopyranosyl-(1-->4)-2-O-methyl-α-L-fucopyranosyl residues seemed to be a part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 02-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1665 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 4 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 134896 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Serovar 4-specific neoglycoprotein, 4-0-methyl-a-L-rhamnopyranosyl(1--> 4)-2-0 - methyl - alpha - L fucopyranosyl oxynonanoyl-bovine serum albumin (BSA) (neoantigen 4) along with whole washed M. avium complex serovar 4 cells and corresponding serovar 4 glycopeptidolipid antigens |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab F85-6 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with whole cells of serovar 4 and acetylated-GPL-4 |
| Proposed Epitope | 4-O-methyl-α-L-rhamnopyranosyl-(1-->4)-2-O-methyl-α-L-fucopyranosyl residues seemed to be a part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 02-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1666 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 4 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 134896 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Serovar 4-specific neoglycoprotein, 4-0-methyl-a-L-rhamnopyranosyl(1--> 4)-2-0 - methyl - alpha - L fucopyranosyl oxynonanoyl-bovine serum albumin (BSA) (neoantigen 4) along with whole washed M. avium complex serovar 4 cells and corresponding serovar 4 glycopeptidolipid antigens |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab F85-5 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with whole cells of serovar 4 and acetylated-GPL-4 |
| Proposed Epitope | 4-O-methyl-α-L-rhamnopyranosyl-(1-->4)-2-O-methyl-α-L-fucopyranosyl residues seemed to be a part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 02-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1667 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 4 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 134896 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Serovar 4-specific neoglycoprotein, 4-0-methyl-a-L-rhamnopyranosyl(1--> 4)-2-0 - methyl - alpha - L fucopyranosyl oxynonanoyl-bovine serum albumin (BSA) (neoantigen 4) along with whole washed M. avium complex serovar 4 cells and corresponding serovar 4 glycopeptidolipid antigens |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab F85-3 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with whole cells of serovar 4 and acetylated-GPL-4 |
| Proposed Epitope | 4-O-methyl-α-L-rhamnopyranosyl-(1-->4)-2-O-methyl-α-L-fucopyranosyl residues seemed to be a part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 02-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1668 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 1 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | N/A |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole cells combined with whole unfractionated lipid |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 3F6 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with whole cells of serovar 1 and acetylated-GPL-1 |
| Proposed Epitope | Distal O-acetyl-α-L-rhamnopyranosyl residues seemed to be a part of the epitope |
| IEDB Epitope | 76726 |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 03-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1669 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 1 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | N/A |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole cells combined with whole unfractionated lipid |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 4C6 |
| Antibody Type Class | IgM |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with whole cells of serovar 1 and acetylated-GPL-1 |
| Proposed Epitope | Distal O-acetyl-α-L-rhamnopyranosyl residues seemed to be a part of the epitope |
| IEDB Epitope | 76726 |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 03-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1670 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 2 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | N/A |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole cells combined with whole unfractionated lipid |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 123.4 |
| Antibody Type Class | IgG2a |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with whole cells of serovar 2 and acetylated-GPL-2 |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranose residues seemed to be a part of the epitope |
| IEDB Epitope | 76852 |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 03-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1671 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 8 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 109375 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole cells combined with whole unfractionated lipid |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 5F7 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with whole cells of serovar 8, acetylated-GPL-8, and GPL-8 |
| Proposed Epitope | 4,6-(l'-carboxyethylidene)-3-0-methyl-beta-D-glucopyranosyl residues seemed to be a part of the epitope |
| IEDB Epitope | 76853 |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 03-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1672 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 8 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 109375 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole cells combined with whole unfractionated lipid |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 2B8 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with whole cells of serovar 8, acetylated-GPL-8, and GPL-8 |
| Proposed Epitope | 4,6-(l'-carboxyethylidene)-3-0-methyl-beta-D-glucopyranosyl residues seemed to be a part of the epitope |
| IEDB Epitope | 76853 |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 03-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1673 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 8 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 109375 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole cells combined with whole unfractionated lipid |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 4D7 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with whole cells of serovar 8, acetylated-GPL-8, GPL-8, acetylated GPL-21, and GPL-21 |
| Proposed Epitope | 4,6-(l'-carboxyethylidene)-3-0-methyl-beta-D-glucopyranosyl residues seemed to be a part of the epitope |
| IEDB Epitope | 76853 |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 04-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1674 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 5210 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | 76769 |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 04-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1675 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 5214 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 04-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1676 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 5510 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 04-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1677 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 2647 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 04-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1678 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 2643 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 04-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1679 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 2675 |
| Antibody Type Class | IgG3 |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 05-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1680 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab B192 |
| Antibody Type Class | IgG2b |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 and it was highly cross-reactive for other serovars and their GPLs |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 05-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1681 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 154 |
| Antibody Type Class | IgG2b |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 and it was highly cross-reactive for other serovars and their GPLs |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 05-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1682 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 1173 |
| Antibody Type Class | IgM |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 and it was highly cross-reactive for other serovars and their GPLs |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 05-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1683 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 1175 |
| Antibody Type Class | IgM |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 and it was highly cross-reactive for other serovars and their GPLs |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 05-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1684 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab R124 |
| Antibody Type Class | IgM |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 and it was highly cross-reactive for other serovars and their GPLs |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 06-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1685 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 7534 |
| Antibody Type Class | IgM |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 and it was highly cross-reactive for other serovars and their GPLs |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 06-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1686 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 4102 |
| Antibody Type Class | IgM |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 and it was highly cross-reactive for other serovars and their GPLs |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 06-10-2010 |
| References | PMC260783 |
| PolysacDB ID | 1687 |
| Carbohydrate Name | Glycopeptidolipid antigen (Drugpedia) |
| Carbohydrate Class | Glycolipid |
| Microbe Name | Mycobacterium avium complex serovar 9 (NCBI Taxonomy) (Drugpedia) |
| Basic Structure | This antigen is composed of a glycosylated lipopeptide core, fatty acyl-D-phenylalanine-D-allothreonine-D-alanine-L-alaninyl-O-(3,4-di-O-methyl-α-L-rhamnopyranoside), to which a haptenic oligosaccharide is linked at the threonine substituent |
| BCSDB Structure | 133663 |
| Proposed Function | This oligosaccharide unit is the source of the dominant immunogenicity of members of the M. avium complex, i.e., their characteristic agglutinability and type specificity |
| Antigenic Nature | Whole washed heat-killed bacteria |
| Carrier Name | Nil |
| Conjugate Method | Nil |
| Antibodies | Mab 4189 |
| Antibody Type Class | IgM |
| Assay System | ELISA, Inhibition assays, dot blot |
| Cross Reactivity | This antibody cross-reacted with Whole cells of serovar 9 and acetylated-GPL-9 and it was highly cross-reactive for other serovars and their GPLs |
| Proposed Epitope | 4-O-acetyl-2,3-di-O-methyl-α-L-fucopyranosyl-(1-->4)-β-D-glucuronopyranosyl residues seemed to be the part of the epitope |
| IEDB Epitope | N/A |
| Proposed Utility | This Mab can be used for the identification and classification of M. avium isolates. This Mab can be applied directly to bacterial cultures, thus allowing easy, rapid identification of at least half of the M. avium isolates encountered in the clinical laboratory |
| Curator ID | AA + AS |
| Date of Curation | 06-10-2010 |
| References | PMC260783 |
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Department of Computational Biology, Indraprastha Institute of Information Technology, Sec - 39A, New Delhi, India - 110020 |