PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

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Citation: Aithal A, Sharma A, Joshi S, Raghava GPS, Varshney GC (2012) PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies. PLoS ONE 7(4): e34613. doi:10.1371/journal.pone.0034613
Total Entries - 1

Entry No. - 1   [TOP]
PolysacDB ID1010
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
MicrobeMycobacterium tuberculosis   (NCBI Taxonomy)   (Drugpedia)
Basic StructureMycobacterial lipoarabinomannan is a phosphatidylinositol anchored lipoglycan that consists of an α1-->6 linked backbone, substituted to varying degrees at position 2 with single α-Man residues, and directly attached to position 6 of the myo-inositol of a phosphatidylinositol (PI) anchor
BCSDB Structure127448
Proposed functionsReported to suppress T cell proliferation and to interfere with gamma interferon-mediated activation of macrophages. Other reported effects include inhibition of protein kinases, inhibition of the synthesis of mRNA encoding IL-2, IL-5, and granulocyte-macrophage colony stimulating factor (GM-CSF) in human T cells and activation of the complement cascade
Antigenic Nature used to produce antibodiesHeat killed Mycobacterium tuberculosis
Carrier NameNil
Conjugation MethodNil
AntibodiesSMITB14
Antibody type and classIgG1
Assay SystemN\A
Cross-reactivitySMITB14 bound to whole M. tuberculosis bacteria (H37Rv and Harlingen strains) as well as to the attenuated BCG, but not to other species such as Escherichia coli strains of various O serotypes, Streptococcus pneumoniae isolates, strains of Salmonella, Yersinia enterocolitica and Y. pseudotuberculosis and Nocardia sp.
Proposed epitopesArabinomannan portion of the antigen
IEDB EpitopeN/A
Proposed UtilityThis antibody might be involved in blocking of mycobacterial invasion. SMITB14 may prevent the uptake of M. tuberculosis through receptor(s) that facilitate bacterial survival and growth.
Curator IDAA + AS
Date of Curation03-01-2010
ReferencesPMC1809178


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