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   HEMOLYTIK: A Database of Hemolytic and Non-hemolytic Peptides

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1490 details
Primary information
Hemolytik ID1490
PMID20196123
YEAR2010
SEQUENCERRWPWWPWKWPLI
LENGTH13
NAMERetro-Ind
C-ter ModificationAmidation
N-ter ModificationFree
Linear/CyclicLinear
StereochemistryL
Modified ResiduesNone
FUNCTIONAntibacterial
ACTIVITY36% hemolysis at 50μM
RBCs SOURCEHuman
Secondary information
PropertiesPhysico-Chemical details
STRUCTURE
Natural StructureFinal Structure
DSSP statesCCCSSCCCCCSCC
SMILESN[C@@H](CCCN=C)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](Cc1c[nH]c(C)c1CC)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1c[nH]c(C)c1CC)C(=O)N[C@@H](Cc1c[nH]c(C)c1CC)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1c[nH]c(C)c1CC)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](Cc1c[nH]c(C)c1CC)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H]([C@@H](C)CC)C(=O)O
External Links
PDB exactPDB partialSP exactSP partialTrEMBL exactTrEMBL partialIEDB exactIEDB partial
NA NA NA NA NA NA NA NA
Reference Informaiton
ARTICLEStructure-activity relationship of indolicidin, a Trp-rich antibacterial peptide.
AUTHORSAndo S,Mitsuyasu K,Soeda Y,Hidaka M,Ito Y,Matsubara K,Shindo M,Uchida Y
JOURNALJ Pept Sci. 2010 Apr;16(4):171-7. doi: 10.1002/psc.1217.