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   HEMOLYTIK: A Database of Hemolytic and Non-hemolytic Peptides

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1450 details
Primary information
Hemolytik ID1450
PMID19576903
YEAR2009
SEQUENCEILPWKWPWWPWRR
LENGTH13
NAMEIL
C-ter ModificationAmidation
N-ter ModificationFree
Linear/CyclicLinear
StereochemistryL
Modified ResiduesNone
FUNCTIONAntimicrobial
ACTIVITY100% hemolysis at 64μM
RBCs SOURCEHuman
Secondary information
PropertiesPhysico-Chemical details
STRUCTURE
Natural StructureFinal Structure
DSSP statesCCCCCCSSCSSCC
SMILESN[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CC(C)C)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1c[nH]c(C)c1CC)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](Cc1c[nH]c(C)c1CC)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1c[nH]c(C)c1CC)C(=O)N[C@@H](Cc1c[nH]c(C)c1CC)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1c[nH]c(C)c1CC)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCN=C)C(=O)O
External Links
PDB exactPDB partialSP exactSP partialTrEMBL exactTrEMBL partialIEDB exactIEDB partial
1g89A NA NA NA NA NA NA NA
Reference Informaiton
ARTICLECoupling molecular dynamics simulations with experiments for the rational design of indolicidin-analogous antimicrobial peptides.
AUTHORSTsai CW,Hsu NY,Wang CH,Lu CY,Chang Y,Tsai HH
JOURNALJ Mol Biol. 2009 Sep 25;392(3):837-54. doi: 10.1016/j.jmb.2009.06.071. Epub 2009 Jul 2.