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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click |
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Protein | Neoepitopes | Tissue | Position | Prot Mutation | cDNA Mutation | Mutation Type | Num Mismatch | Promiscuity (%) | Cell Line | CTL | MHC I | NHLApred | MHC II | Bcell | ||||||||||||
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RECQL4 | ACTCTRPPS | BONE | 852 | p.CT857del | c.2569_2574delTGCACC | In_Frame_Del | 1 | 0.11 | HS821T | N | 0 | 0 | 0 | N | ||||||||||||
RECQL4 | FPACTCTRP | BONE | 850 | p.CT857del | c.2569_2574delTGCACC | In_Frame_Del | 2 | 0.11 | HS821T | N | 3 | 0 | 0 | N | ||||||||||||
RECQL4 | PACTCTRPP | BONE | 851 | p.CT857del | c.2569_2574delTGCACC | In_Frame_Del | 2 | 0.11 | HS821T | N | 0 | 0 | 0 | N | ||||||||||||
RECQL4 | VFPACTCTR | BONE | 849 | p.CT857del | c.2569_2574delTGCACC | In_Frame_Del | 1 | 0.11 | HS821T | N | 2 | 0 | 4 | N | ||||||||||||