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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click |
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Protein | Neoepitopes | Tissue | Position | Prot Mutation | cDNA Mutation | Mutation Type | Num Mismatch | Promiscuity (%) | Cell Line | CTL | MHC I | NHLApred | MHC II | Bcell | ||||||||||||
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PDGFRA | CSLCTSRND | HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 125 | p.T124fs | c.372_373delAG | Frame_Shift_Del | 6 | 0.11 | KASUMI1 | N | 1 | 0 | 0 | N | ||||||||||||
PDGFRA | DPCSLCTSR | HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 123 | p.T124fs | c.372_373delAG | Frame_Shift_Del | 6 | 0.11 | KASUMI1 | N | 3 | 0 | 0 | N | ||||||||||||
PDGFRA | LCTSRNDGL | HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 127 | p.T124fs | c.372_373delAG | Frame_Shift_Del | 6 | 0.11 | KASUMI1 | N | 8 | 0 | 0 | Y | ||||||||||||
PDGFRA | PCSLCTSRN | HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 124 | p.T124fs | c.372_373delAG | Frame_Shift_Del | 6 | 0.11 | KASUMI1 | N | 0 | 0 | 0 | N | ||||||||||||
PDGFRA | PDPCSLCTS | HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 122 | p.T124fs | c.372_373delAG | Frame_Shift_Del | 6 | 0.11 | KASUMI1 | N | 0 | 0 | 0 | N | ||||||||||||
PDGFRA | SLCTSRNDG | HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 126 | p.T124fs | c.372_373delAG | Frame_Shift_Del | 6 | 0.11 | KASUMI1 | N | 0 | 0 | 0 | N | ||||||||||||