Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click HERE


Result Reset Search:
ProteinNeoepitopesTissuePositionProt MutationcDNA MutationMutation TypeNum MismatchPromiscuity (%)Cell LineCTLMHC INHLApredMHC IIBcell
MYLKAHLVPLTFGSTOMACH1336p.P1334fsc.4001_4001delCFrame_Shift_Del50.112313287N000N
MYLKAPRHLRRQQENDOMETRIUM1227p.P1228fsc.3684_3684delCFrame_Shift_Del60.11HEC108N200N
MYLKAQESQWSCLENDOMETRIUM1250p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N600N
MYLKCPLRSSSSLENDOMETRIUM1236p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N1800N
MYLKDKPDPQLAHSTOMACH1329p.P1334fsc.4001_4001delCFrame_Shift_Del40.112313287N100N
MYLKDPQLAHLVPSTOMACH1332p.P1334fsc.4001_4001delCFrame_Shift_Del50.112313287N000N
MYLKESQWSCLAKENDOMETRIUM1252p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N300N
MYLKHLRRQQCPLENDOMETRIUM1230p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N800N
MYLKHLVPLTFGASTOMACH1337p.P1334fsc.4001_4001delCFrame_Shift_Del50.112313287N400N
MYLKKKKPAPRHLENDOMETRIUM1223p.P1228fsc.3684_3684delCFrame_Shift_Del30.11HEC108Y3120N
MYLKKKPAPRHLRENDOMETRIUM1224p.P1228fsc.3684_3684delCFrame_Shift_Del40.11HEC108N100N
MYLKKPAPRHLRRENDOMETRIUM1225p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108Y6110N
MYLKKPDPQLAHLSTOMACH1330p.P1334fsc.4001_4001delCFrame_Shift_Del50.112313287Y20100N
MYLKLAHLVPLTFSTOMACH1335p.P1334fsc.4001_4001delCFrame_Shift_Del50.112313287N708N
MYLKLRRQQCPLRENDOMETRIUM1231p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N3016N
MYLKLRSSSSLRTENDOMETRIUM1238p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N2018Y
MYLKLRTRRYAQEENDOMETRIUM1244p.P1228fsc.3684_3684delCFrame_Shift_Del60.11HEC108N103N
MYLKLVPLTFGAPSTOMACH1338p.P1334fsc.4001_4001delCFrame_Shift_Del50.112313287N000N
MYLKPAPRHLRRQENDOMETRIUM1226p.P1228fsc.3684_3684delCFrame_Shift_Del60.11HEC108N000N
MYLKPDPQLAHLVSTOMACH1331p.P1334fsc.4001_4001delCFrame_Shift_Del50.112313287N100N
MYLKPLRSSSSLRENDOMETRIUM1237p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N000Y
MYLKPQLAHLVPLSTOMACH1333p.P1334fsc.4001_4001delCFrame_Shift_Del50.112313287N500N
MYLKPRHLRRQQCENDOMETRIUM1228p.P1228fsc.3684_3684delCFrame_Shift_Del60.11HEC108N200N
MYLKQCPLRSSSSENDOMETRIUM1235p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N100N
MYLKQESQWSCLAENDOMETRIUM1251p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N600N
MYLKQLAHLVPLTSTOMACH1334p.P1334fsc.4001_4001delCFrame_Shift_Del50.112313287N300N
MYLKQQCPLRSSSENDOMETRIUM1234p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N000N
MYLKRHLRRQQCPENDOMETRIUM1229p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N000N
MYLKRQQCPLRSSENDOMETRIUM1233p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N000N
MYLKRRQQCPLRSENDOMETRIUM1232p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N200N
MYLKRRYAQESQWENDOMETRIUM1247p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N400N
MYLKRSSSSLRTRENDOMETRIUM1239p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N300Y
MYLKRTRRYAQESENDOMETRIUM1245p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N100N
MYLKRYAQESQWSENDOMETRIUM1248p.P1228fsc.3684_3684delCFrame_Shift_Del60.11HEC108N100N
MYLKSLRTRRYAQENDOMETRIUM1243p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108Y1150N
MYLKSSLRTRRYAENDOMETRIUM1242p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108Y290N
MYLKSSSLRTRRYENDOMETRIUM1241p.P1228fsc.3684_3684delCFrame_Shift_Del40.11HEC108Y5120Y
MYLKSSSSLRTRRENDOMETRIUM1240p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108Y390Y
MYLKTRRYAQESQENDOMETRIUM1246p.P1228fsc.3684_3684delCFrame_Shift_Del50.11HEC108N100N
MYLKVDKPDPQLASTOMACH1328p.P1334fsc.4001_4001delCFrame_Shift_Del30.112313287N400N
MYLKVPLTFGAPHSTOMACH1339p.P1334fsc.4001_4001delCFrame_Shift_Del50.112313287N200Y
MYLKYAQESQWSCENDOMETRIUM1249p.P1228fsc.3684_3684delCFrame_Shift_Del60.11HEC108N700N
MYLKAAMPPSDHPENDOMETRIUM1234p.P1238fsc.3713_3714insCFrame_Shift_Ins40.11HEC1AN000N
MYLKAMPPSDHPVENDOMETRIUM1235p.P1238fsc.3713_3714insCFrame_Shift_Ins50.11HEC1AN500Y
MYLKKAAMPPSDHENDOMETRIUM1233p.P1238fsc.3713_3714insCFrame_Shift_Ins30.11HEC1AN000N
MYLKMPPSDHPVPENDOMETRIUM1236p.P1238fsc.3713_3714insCFrame_Shift_Ins50.11HEC1AN200Y