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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click |
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Protein | Neoepitopes | Tissue | Position | Prot Mutation | cDNA Mutation | Mutation Type | Num Mismatch | Promiscuity (%) | Cell Line | CTL | MHC I | NHLApred | MHC II | Bcell | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALPK2 | RTYGARGVQ | ENDOMETRIUM | 523 | p.K523fs | c.1568_1568delA | Frame_Shift_Del | 6 | 0.55 | AN3CA | N | 0 | 0 | 0 | N | ||||||||||||
ALPK2 | RTYGARGVQ | OVARY | 523 | p.K523fs | c.1568_1568delA | Frame_Shift_Del | 6 | 0.55 | IGROV1 | N | 0 | 0 | 0 | N | ||||||||||||
ALPK2 | RTYGARGVQ | ENDOMETRIUM | 523 | p.K523fs | c.1568_1568delA | Frame_Shift_Del | 6 | 0.55 | JHUEM1 | N | 0 | 0 | 0 | N | ||||||||||||
ALPK2 | RTYGARGVQ | SOFT_TISSUE | 523 | p.K523fs | c.1568_1568delA | Frame_Shift_Del | 6 | 0.55 | SKUT1 | N | 0 | 0 | 0 | N | ||||||||||||
ALPK2 | RTYGARGVQ | LARGE_INTESTINE | 523 | p.K523fs | c.1568_1568delA | Frame_Shift_Del | 6 | 0.55 | SNU175 | N | 0 | 0 | 0 | N | ||||||||||||
ALPK2 | TYGARGVQG | ENDOMETRIUM | 524 | p.K523fs | c.1568_1568delA | Frame_Shift_Del | 6 | 0.55 | AN3CA | N | 0 | 0 | 0 | N | ||||||||||||
ALPK2 | TYGARGVQG | OVARY | 524 | p.K523fs | c.1568_1568delA | Frame_Shift_Del | 6 | 0.55 | IGROV1 | N | 0 | 0 | 0 | N | ||||||||||||
ALPK2 | TYGARGVQG | ENDOMETRIUM | 524 | p.K523fs | c.1568_1568delA | Frame_Shift_Del | 6 | 0.55 | JHUEM1 | N | 0 | 0 | 0 | N | ||||||||||||
ALPK2 | TYGARGVQG | SOFT_TISSUE | 524 | p.K523fs | c.1568_1568delA | Frame_Shift_Del | 6 | 0.55 | SKUT1 | N | 0 | 0 | 0 | N | ||||||||||||
ALPK2 | TYGARGVQG | LARGE_INTESTINE | 524 | p.K523fs | c.1568_1568delA | Frame_Shift_Del | 6 | 0.55 | SNU175 | N | 0 | 0 | 0 | N | ||||||||||||
ALPK2 | RRYPSSLLC | HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 559 | p.G522fs | c.1566_1567insG | Frame_Shift_Ins | 6 | 0.11 | KASUMI2 | N | 4 | 0 | 0 | N | ||||||||||||
ALPK2 | YNRRYPSSL | HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 557 | p.G522fs | c.1566_1567insG | Frame_Shift_Ins | 6 | 0.11 | KASUMI2 | N | 9 | 0 | 4 | N | ||||||||||||
ALPK2 | ESPIHWDHN | HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 680 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | K562 | N | 1 | 0 | 0 | N | ||||||||||||
ALPK2 | ESPIHWDHN | LUNG | 680 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | NCIH1105 | N | 1 | 0 | 0 | N | ||||||||||||
ALPK2 | ESPIHWDHN | LARGE_INTESTINE | 680 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | NCIH716 | N | 1 | 0 | 0 | N | ||||||||||||
ALPK2 | ESPIHWDHN | OVARY | 680 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | NIHOVCAR3 | N | 1 | 0 | 0 | N | ||||||||||||
ALPK2 | ESPIHWDHN | OVARY | 680 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | OAW28 | N | 1 | 0 | 0 | N | ||||||||||||
ALPK2 | ESPIHWDHN | OVARY | 680 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | ONCODG1 | N | 1 | 0 | 0 | N | ||||||||||||
ALPK2 | FLLKLRRGP | HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 690 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | K562 | N | 2 | 0 | 18 | N | ||||||||||||
ALPK2 | FLLKLRRGP | LUNG | 690 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | NCIH1105 | N | 2 | 0 | 18 | N | ||||||||||||
ALPK2 | FLLKLRRGP | LARGE_INTESTINE | 690 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | NCIH716 | N | 2 | 0 | 18 | N | ||||||||||||
ALPK2 | FLLKLRRGP | OVARY | 690 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | NIHOVCAR3 | N | 2 | 0 | 18 | N | ||||||||||||
ALPK2 | FLLKLRRGP | OVARY | 690 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | OAW28 | N | 2 | 0 | 18 | N | ||||||||||||
ALPK2 | FLLKLRRGP | OVARY | 690 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | ONCODG1 | N | 2 | 0 | 18 | N | ||||||||||||
ALPK2 | HWDHNNFLL | HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 684 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | K562 | Y | 8 | 10 | 0 | N | ||||||||||||
ALPK2 | HWDHNNFLL | LUNG | 684 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | NCIH1105 | Y | 8 | 10 | 0 | N | ||||||||||||
ALPK2 | HWDHNNFLL | LARGE_INTESTINE | 684 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | NCIH716 | Y | 8 | 10 | 0 | N | ||||||||||||
ALPK2 | HWDHNNFLL | OVARY | 684 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | NIHOVCAR3 | Y | 8 | 10 | 0 | N | ||||||||||||
ALPK2 | HWDHNNFLL | OVARY | 684 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | OAW28 | Y | 8 | 10 | 0 | N | ||||||||||||
ALPK2 | HWDHNNFLL | OVARY | 684 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | ONCODG1 | Y | 8 | 10 | 0 | N | ||||||||||||
ALPK2 | LLKLRRGPQ | HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 691 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | K562 | N | 2 | 0 | 11 | N | ||||||||||||
ALPK2 | LLKLRRGPQ | LUNG | 691 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | NCIH1105 | N | 2 | 0 | 11 | N | ||||||||||||
ALPK2 | LLKLRRGPQ | LARGE_INTESTINE | 691 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | NCIH716 | N | 2 | 0 | 11 | N | ||||||||||||
ALPK2 | LLKLRRGPQ | OVARY | 691 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | NIHOVCAR3 | N | 2 | 0 | 11 | N | ||||||||||||
ALPK2 | LLKLRRGPQ | OVARY | 691 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | OAW28 | N | 2 | 0 | 11 | N | ||||||||||||
ALPK2 | LLKLRRGPQ | OVARY | 691 | p.P682fs | c.2045_2046insC | Frame_Shift_Ins | 6 | 0.66 | ONCODG1 | N | 2 | 0 | 11 | N | ||||||||||||