Assistance page of CancerPPD


    NOTE : This page provides help to the users and explains the working of each tool integrated in this database.                   Click on the link below to go to the help section of the respective tool.

       1. Search

          1-1. Basic

          1-2. Conditional

          1-3. Peptide

          1-4. SMILES

       2. Browse

          2-1. Protein wise

          2-2. Peptide wise

          2-3. Tissue wise

          2-4. Cell lines wise

          2-5. Year-wise

          2-6. Assay Type

          2-7. Length

          2-8. Modification

       3. Tools

          3-1. BLAST

          3-2. Smith-Waterman

          3-3. Mapping

          3-4. Sequence Alignment

          3-5. Structure Alignment

HELP PAGE FOR SEQUENCE ALIGNMENT

1.To perform sequence alignment, user can paste his query peptide sequence in fasta format

2.User can select the peptide ids of CancerPPD database in the id box with which he desires to align his sequences.


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3.Finally click on the Run Anlysis! box to get the result as displayed below.