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Details of CancerPDF entry with Sequence VVSLGSPSGEVSHPRKT
Primary information
sequence IDSeq_9462
Peptide sequenceVVSLGSPSGEVSHPRKT
CancerPDF_ID CancerPDF_ID1682, CancerPDF_ID8095, CancerPDF_ID10285,
PMID21136997,24982608,21805675
Protein NameAlpha-2-HS-glycoprotein,Alpha-2-HS-glycoprotein,Alpha-2-HS-glycoprotein
UniprotKB Entry NameFETUA_HUMAN,FETUA_HUMAN,FETUA_HUMAN
FluidSerum,Urine,Urine
M/Z1735.9217,NA,1736.9297
Charge1,NA,NA
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,Nano-LC-MS,MALDI-TOF
Peptide Identification techniqueLC-MS-MS/MS,MS/MS,MALDI-TOF-MS
Quantification TechniqueLC-ESI-MS,NA,NA
Labelled/Label FreeLabel Free,Label Free,Label Free
FDRNA,0.01,1
CancerPDF_ID CancerPDF_ID1682, CancerPDF_ID8095, CancerPDF_ID10285,
p-ValueNA,NA,NA
SoftwareMASCOT(v. 2.2.01),"GPM search engine, MASCOT",NA
Length17,17,17
Cancer TypeColorectal cancer,Ovarian cancer,Muscle-invasive bladder cancer
DatabaseSwissProt Database,IPI 3.71 Human Database ,SwissProt Database
ModificationNA,NA,NA
Number of Patients30 patients and 30 healthy controls,6 Ovarian cancer patients and 6 normal individuals,751 bladder cancer and 127 control
RegulationNA,Uniquely present in case of urine of ovarian cancer patients,Differentially expressed between cancer vs normal samples
ValidationLeave One out Cross validation,NA,Mann-Whitney tests and areas under receiver-operator characteristic
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasNA
IEDB