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Details of CancerPDF entry with Sequence VNDNEEGFFSAR
Primary information
sequence IDSeq_9194
Peptide sequenceVNDNEEGFFSAR
CancerPDF_ID CancerPDF_ID861, CancerPDF_ID2761,
PMID19795908,21136997
Protein NameFibrinogen beta chain,Fibrinogen beta chain
UniprotKB Entry NameFIBB_HUMAN,FIBB_HUMAN
FluidPlasma,Plasma
M/Z692.81,1383.6055
Charge2,1
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),LC-ESI-MS
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,NA
CancerPDF_ID CancerPDF_ID861, CancerPDF_ID2761,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01)
Length12,12
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Normal
DatabaseNCBI refseq Protein Database,SwissProt Database
ModificationNA,NA
Number of Patients"42 normal, 26 patients",27 healthy individuals
RegulationNA,NA
ValidationNA,Leave One out Cross validation
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB