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Details of CancerPDF entry with Sequence VNDNEEGFFSA
Primary information
sequence IDSeq_9193
Peptide sequenceVNDNEEGFFSA
CancerPDF_ID CancerPDF_ID862, CancerPDF_ID2123,
PMID19795908,21136997
Protein NameFibrinogen beta chain,Fibrinogen beta
UniprotKB Entry NameFIBB_HUMAN,F1BB_HUMAN
FluidPlasma,Serum
M/Z614.75,1227.5044
Charge2,1
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),LC-ESI-MS
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,NA
CancerPDF_ID CancerPDF_ID862, CancerPDF_ID2123,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01)
Length11,11
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Colorectal cancer
DatabaseNCBI refseq Protein Database,SwissProt Database
ModificationNA,NA
Number of Patients"42 normal, 26 patients",30 patients and 30 healthy controls
RegulationNA,NA
ValidationNA,Leave One out Cross validation
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB