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Details of CancerPDF entry with Sequence TVGSLAGQPLQERA
Primary information
sequence IDSeq_8656
Peptide sequenceTVGSLAGQPLQERA
CancerPDF_ID CancerPDF_ID326, CancerPDF_ID9580,
PMID19795908,21533267
Protein NameApolipoprotein E,Apolipoprotein E
UniprotKB Entry NameAPOE_HUMAN,APOE_HUMAN
FluidPlasma,Serum
M/Z713.8825,713.86
Charge2,2
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC/MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),Multiple Reaction Monitoring
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,1.49
CancerPDF_ID CancerPDF_ID326, CancerPDF_ID9580,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT
Length14,14
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Lung adenocarcinoma
DatabaseNCBI refseq Protein Database,Swissprot Database (57.4)
ModificationNA,NA
Number of Patients"41 normal, 28 patients",62 lung adenocarcinoma and 30 healthy control
RegulationNA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationNA,MRM-based validation of 19 candidates
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB