Primary information |
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sequence ID | Seq_8527 |
Peptide sequence | TQPRGPPASSPAPAPKF |
CancerPDF_ID | CancerPDF_ID829, CancerPDF_ID2007, CancerPDF_ID12474, |
PMID | 19795908,21136997,26992070 |
Protein Name | Zyxin,Zyxin,Zyxin |
UniprotKB Entry Name | ZYX_HUMAN,ZYX_HUMAN,NA |
Fluid | Plasma,Serum,Serum |
M/Z | 569.3,1704.89475,1704.8948 |
Charge | 3,1,NA |
Mass (in Da) | NA,NA,1705.906284 |
fdr | NA,NA,NA |
Profiling Technique | LC-MS,LC-MS,LC-MS |
Peptide Identification technique | MALDI-TOF/TOF,LC-MS-MS/MS,LC-MS/MS |
Quantification Technique | LC-MRM (multiple reaction monitoring),LC-ESI-MS,NA |
Labelled/Label Free | Labelled,Label Free,Label Free |
FDR | less than 7%,NA,FDR 1 % |
CancerPDF_ID | CancerPDF_ID829, CancerPDF_ID2007, CancerPDF_ID12474, |
p-Value | NA,NA,NA |
Software | FlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01),SEQUEST and Maxquant |
Length | 17,17,17 |
Cancer Type | Ductal adenocarcinoma of the pancreas (DAP),Colorectal cancer,Melanoma |
Database | NCBI refseq Protein Database,SwissProt Database,SwissProt Database |
Modification | NA,NA,NA |
Number of Patients | "34 normal, 12 patients",30 patients and 30 healthy controls,8 cancer samples and 4 healthy samples |
Regulation | NA,NA,"Present in 4 cancer samples out of 8 cancer samples. ,Present in 0 healthy samples out of 4 healthy samples." |
Validation | NA,Leave One out Cross validation,na |
Sensitivity | NA,NA,NA |
Specificity | NA,NA,NA |
Accuracy | NA,NA,NA |
Peptide Atlas | NA |
IEDB | |