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Details of CancerPDF entry with Sequence SVTEQDSKDSTYSL
Primary information
sequence IDSeq_7895
Peptide sequenceSVTEQDSKDSTYSL
CancerPDF_ID CancerPDF_ID7181, CancerPDF_ID7182, CancerPDF_ID7183, CancerPDF_ID7184, CancerPDF_ID10195,
PMID24982608,24982608,24982608,24982608,21805675
Protein NameIg kappa chain C region,IGKat protein,IGKat protein,Putative uncharacterized protein IGKC,Ig kappa chain C region
UniprotKB Entry NameIGKC_HUMAN,Q6PJF2_HUMAN,Q6PJF2_HUMAN,NA,IGKC_HUMAN
FluidUrine,Urine,Urine,Urine,Urine
M/ZNA,NA,NA,NA,1559.6917
ChargeNA,NA,NA,NA,NA
Mass (in Da)NA,NA,NA,NA,NA
fdrNA,NA,NA,NA,NA
Profiling TechniqueNano-LC-MS,Nano-LC-MS,Nano-LC-MS,Nano-LC-MS,MALDI-TOF
Peptide Identification techniqueMS/MS,MS/MS,MS/MS,MS/MS,MALDI-TOF-MS
Quantification TechniqueNA,NA,NA,NA,NA
Labelled/Label FreeLabel Free,Label Free,Label Free,Label Free,Label Free
FDR0.01,0.01,0.01,0.01,1
CancerPDF_ID CancerPDF_ID7181, CancerPDF_ID7182, CancerPDF_ID7183, CancerPDF_ID7184, CancerPDF_ID10195,
p-ValueNA,NA,NA,NA,NA
Software"GPM search engine, MASCOT","GPM search engine, MASCOT","GPM search engine, MASCOT","GPM search engine, MASCOT",NA
Length14,14,14,14,14
Cancer TypeOvarian cancer,Ovarian cancer,Ovarian cancer,Ovarian cancer,Muscle-invasive bladder cancer
DatabaseIPI 3.71 Human Database ,IPI 3.71 Human Database ,IPI 3.71 Human Database ,IPI 3.71 Human Database ,SwissProt Database
ModificationNA,NA,NA,NA,NA
Number of Patients6 Ovarian cancer patients and 6 normal individuals,6 Ovarian cancer patients and 6 normal individuals,6 Ovarian cancer patients and 6 normal individuals,6 Ovarian cancer patients and 6 normal individuals,751 bladder cancer and 127 control
RegulationUniquely present in case of urine of ovarian cancer patients,Uniquely present in case of urine of ovarian cancer patients,Uniquely present in case of urine of ovarian cancer patients,Uniquely present in case of urine of ovarian cancer patients,Differentially expressed between cancer vs normal samples
ValidationNA,NA,NA,NA,Mann-Whitney tests and areas under receiver-operator characteristic
SensitivityNA,NA,NA,NA,NA
SpecificityNA,NA,NA,NA,NA
AccuracyNA,NA,NA,NA,NA
Peptide AtlasNA
IEDB