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Details of CancerPDF entry with Sequence SPVTPKFTPVAS
Primary information
sequence IDSeq_7518
Peptide sequenceSPVTPKFTPVAS
CancerPDF_ID CancerPDF_ID828, CancerPDF_ID12246,
PMID19795908,26992070
Protein NameZyxin,Zyxin
UniprotKB Entry NameZYX_HUMAN,NA
FluidPlasma,Serum
M/Z615.83,1229.6656
Charge2,NA
Mass (in Da)NA,1230.675585
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),NA
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,FDR 1 %
CancerPDF_ID CancerPDF_ID828, CancerPDF_ID12246,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,SEQUEST and Maxquant
Length12,12
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Melanoma
DatabaseNCBI refseq Protein Database,SwissProt Database
ModificationNA,NA
Number of Patients"34 normal, 12 patients",8 cancer samples and 4 healthy samples
RegulationNA,"Present in 3 cancer samples out of 8 cancer samples. ,Present in 2 healthy samples out of 4 healthy samples."
ValidationNA,na
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB