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Details of CancerPDF entry with Sequence SLDRNLPSDSQDLGQHGLEEDFM
Primary information
sequence IDSeq_7302
Peptide sequenceSLDRNLPSDSQDLGQHGLEEDFM
CancerPDF_ID CancerPDF_ID2032, CancerPDF_ID9879, CancerPDF_ID9880,
PMID21136997,21533267,21533267
Protein NameSecretory granule proteoglycan core protein,Serglycin,Serglycin
UniprotKB Entry NameSRGN_HUMAN,SRGN_HUMAN,SRGN_HUMAN
FluidSerum,Serum,Serum
M/Z2602.16056,873.71,868.4
Charge1,3,3
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,LC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC/MS/MS,LC/MS/MS
Quantification TechniqueLC-ESI-MS,Multiple Reaction Monitoring,Multiple Reaction Monitoring
Labelled/Label FreeLabel Free,Label Free,Label Free
FDRNA,1.49,1.49
CancerPDF_ID CancerPDF_ID2032, CancerPDF_ID9879, CancerPDF_ID9880,
p-ValueNA,NA,NA
SoftwareMASCOT(v. 2.2.01),MASCOT,MASCOT
Length23,23,23
Cancer TypeColorectal cancer,Lung adenocarcinoma,Lung adenocarcinoma
DatabaseSwissProt Database,Swissprot Database (57.4),Swissprot Database (57.4)
ModificationNA,Oxidation,NA
Number of Patients30 patients and 30 healthy controls,62 lung adenocarcinoma and 30 healthy control,62 lung adenocarcinoma and 30 healthy control
RegulationNA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal","Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationLeave One out Cross validation,MRM-based validation of 19 candidates,MRM-based validation of 19 candidates
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasPeptideAtlas
IEDB526213 526214